BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZB08FM1.SCF screened BAC_end (923 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1365 1249 0.0 >3x_Contig1365 Length = 9349 Score = 1249 bits (630), Expect = 0.0 Identities = 752/781 (96%), Gaps = 10/781 (1%) Strand = Plus / Plus Query: 85 ctcgtgatgtagtaatctaaatctattttcttcaagtagatcagagggtatggataatat 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8501 ctcgtgatgtagtaatctaaatctattttcttcaagtagatcagagggtatggataatat 8560 Query: 145 attccttaacacatagagctcaagtttatcaaagttcttatccacagagttttccaacaa 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8561 attccttaacacatagagctcaagtttatcaaagttcttatccacagagttttccaacaa 8620 Query: 205 agattctagtttgtgtggtacctattttaatttcgtcagagaaatctttcttcccaatga 264 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8621 agattctagtttg-gcggtacctattttaatttcgtcagagaaatctttcttcccaatga 8679 Query: 265 tattcctttgcattaaatacttctccatcgcattagtgcacttgtacataatctcattga 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8680 tattcctttgcattaaatacttctccatcgcattagtgcacttgtacataatctcattga 8739 Query: 325 cggcattgataatgtcgtcaactaaagaaattggtggataacccaaatgttccgtcaaca 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8740 cggcattgataatgtcgtcaactaaagaaattggtggataacccaaatgttccgtcaaca 8799 Query: 385 aggacgtactctgcatagttggtgtagtcattggatatttttaaagtgacctcactaagt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8800 aggacgtactctgcatagttggtgtagtcattggatatttttaaagtgacctcactaagt 8859 Query: 445 ggctgtagagtccaggtcacttggagctattctgctctgttctgttttcctgcgtttgtt 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8860 ggctgtagagtccaggtcacttggagctattctgctctgttctgttttcctgcgtttgtt 8919 Query: 505 gatcttttatgttctgtttttattttcgcgaacacttgaataattagaaagtgcatacaa 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8920 gatcttttatgttctgtttttattttcgcgaacacttgaataattagaaagtgcatacaa 8979 Query: 565 actgacaaaatattatacaacccagt-actgaattaaagatggaatagaaatagttagta 623 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 8980 actgacaaaatattatacaa-ccagtaactgaattaaagatggaatagaaatagttagta 9038 Query: 624 ttatttattacacatatggctctagaaataatttcatataaactagtctcactttaatca 683 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9039 ttatttaatacacatatggctctagaaataatttcatataaactagtctcactttaatca 9098 Query: 684 ctctcactacggtcgctatcactggagtctttttcataaattatttcatctccattatct 743 |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9099 ctctcactactgtcgctatcactggagtctttttcataaataatttcatctccattatc- 9157 Query: 744 ttctttgacaccggacatttccagtgcctttggggggaatctgaattctcttttagaacc 803 ||| ||||| | |||| ||||||| | || | | ||||||| |||||| ||||||| | Sbjct: 9158 ttccttgaccaccgacaattccagttc--tttgtgtgaatctgtattctc-tttagaaac 9214 Query: 804 ttactcatcgaaaacaatttgttttgtttgaaacctacaggtaaatttttccgcttctga 863 || |||||||||||||||| | |||||||||| |||||||| || |||||||||||||| Sbjct: 9215 ttcatcatcgaaaacaattt-tcttgtttgaaa-ctacaggt-aagttttccgcttctga 9271 Query: 864 a 864 | Sbjct: 9272 a 9272 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7742 Number of Sequences: 1807 Number of extensions: 7742 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 923 length of database: 10,358,551 effective HSP length: 16 effective length of query: 907 effective length of database: 10,329,639 effective search space: 9368982573 effective search space used: 9368982573 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)