BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZB08RM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1140 1072 0.0 >3x_Contig1140 Length = 5352 Score = 1072 bits (541), Expect = 0.0 Identities = 629/652 (96%), Gaps = 5/652 (0%) Strand = Plus / Plus Query: 45 atatgcagcgctgtacttttcccggagaggtttcaaagcatcaacatatttctgtttctc 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 atatgcagcgctgtacttttcccggagaggtttcaaagcatcaacatatttctgtttctc 555 Query: 105 actttctgatagtgacctccactgtttccctgcaatcttcatagcgccagggttggaaac 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 actttctgatagtgacctccactgtttccctgcaatcttcatagcgccagggttggaaac 615 Query: 165 attgtgtgatgcgcaaatatgatcgtgcacttggctgaaatagtaatagtatgcagttgg 224 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 616 attgtgtgatgcgcaaatatgatcgtgcacttggctgaaatagtaagagaatgcagttgg 675 Query: 225 tggtctctttggcttgactgctgcttcaagagcaattggggaaactgacaaaaagcgttt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 tggtctctttggcttgactgctgcttcaagagcaattggggaaactgacaaaaagcgttt 735 Query: 285 aaatatcatagttgaatagttagtcgattccttagtagaatactttgttatacttttgaa 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 aaatatcatagttgaatagttagtcgattccttagtagaatactttgttatacttttgaa 795 Query: 345 gggaagtaatagaatgagtagataatatatttaagcgtttgacttgtacaagaaacttgg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 gggaagtaatagaatgagtagataatatatttaagcgtttgacttgtacaagaaacttgg 855 Query: 405 catgggtttgtattatagcggatgattgcttgtttttaattgtttgtttttgttttggaa 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 catgggtttgtattatagcggatgattgcttgtttttaattgtttgtttttgttttggaa 915 Query: 465 gggtaaaaaaaaggtctcataagatgggggggcgggtagcgctcgagaagatttctgant 524 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 916 gggtaaaaaaaaggtctcataaga-gggggggcgggtagcgctcgagaagatttctgatt 974 Query: 525 tataagtcacgtgtatgtccgatttaaggtgaaatggacttgggttatcaaaa-taggtt 583 |||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| Sbjct: 975 tataagtcacgtgtatgtccgattaagggtgaaatggacttgggttatcaaaattaggtt 1034 Query: 584 acaatgccattcaaattattgagatttggactggaattgcatgatctttgaaaaagcctt 643 |||||||||||||||||||||||||||| |||| ||| |||||| | || |||| | | Sbjct: 1035 acaatgccattcaaattattgagatttgaactgaaatgcaatgatcatggagaaag-cgt 1093 Query: 644 ttaacggatatcaaccgggtgaatttttgtcgaaccaagtccttgctaatat 695 | ||||||| |||||||||| |||||||||| ||||||| ||||||||||| Sbjct: 1094 tagacggatagcaaccgggtg-atttttgtcg-accaagtacttgctaatat 1143 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7724 Number of Sequences: 1807 Number of extensions: 7724 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)