BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZB10FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1762 1017 0.0 >3x_Contig1762 Length = 22098 Score = 1017 bits (513), Expect = 0.0 Identities = 627/657 (95%), Gaps = 6/657 (0%) Strand = Plus / Plus Query: 89 ttaactcagcgtactgcgaattctctattgggagacacatctgaagaaaagaagtcattt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11166 ttaactcagcgtactgcgaattctctattgggagacacatctgaagaaaagaagtcattt 11225 Query: 149 tacgaagaattttgtagtaagaatgttgaggatttggaattggcacattaccaaaatcca 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11226 tacgaagaattttgtagtaagaatgttgaggatttggaattggcacattaccaaaatcca 11285 Query: 209 acccaagaatttaacttgaatctcctaacagggctagattcattcgattttgaattagag 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11286 acccaagaatttaacttgaatctcctaacagggctagattcattcgattttgaattagag 11345 Query: 269 atatggaggaaacgtcatgatttatagacacgttaacttccacctcgaaaacaaatcaat 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11346 atatggaggaaacgtcatgatttatagacacgttaacttccacctcgaaaacaaatcaat 11405 Query: 329 atttagttatcttacgaagtgaccataagagaaataatattatattgcagtttttaagtt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11406 atttagttatcttacgaagtgaccataagagaaataatattatattgcagtttttaagtt 11465 Query: 389 aattatatatgaacatgagaatatagaaatgatagtaatttttttttttttgtaaagctt 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11466 aattatatatgaacatgagaatatagaaatgatagtaatttttttttttttgtaaagctt 11525 Query: 449 tatctattgctcaaccttacccaaaggttgccccattttgactttgtcgccaacgttgat 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11526 tatctattgctcaaccttacccaaaggttgccccattttgactttgtcgccaacgttgat 11585 Query: 509 ttttgagttaaactctcttggggcttc-aagcat-aaaccactgttgatcct-acatgaa 565 ||| |||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||| Sbjct: 11586 tttgaagttaaactctcttggtgcttcaaagcataaaaccactgttgatcctaacatgaa 11645 Query: 566 accacccttttcttcaccctttattaaa-gcacgccaact-attctttgctagcattttc 623 ||||||| |||||||||||||||| ||| |||||||| || || |||||||||||||||| Sbjct: 11646 accacccatttcttcaccctttatcaaaggcacgccacctaatactttgctagcattttc 11705 Query: 624 atatgttgcttcattacaagtatgcggttaacaaggcctctgaattttttcattggaaat 683 |||||||||||||| |||||||||||||| |||| | |||||| |||||||||| | || Sbjct: 11706 atatgttgcttcataacaagtatgcggtttacaatgtctctgagttttttcatttgtaa- 11764 Query: 684 ttggttcttaataaaattccatttggatcgatccgacttttgttgcttcgactgggg 740 || |||||| || ||| | || || |||||||||||| ||||| ||| ||||||||| Sbjct: 11765 ttagttctttatcaaagttcaatttgatcgatccgacatttgtagctccgactgggg 11821 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,603 Number of Sequences: 1807 Number of extensions: 14603 Number of successful extensions: 224 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)