BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZB11FM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1676 1160 0.0 >3x_Contig1676 Length = 15800 Score = 1160 bits (585), Expect = 0.0 Identities = 640/653 (98%), Gaps = 4/653 (0%) Strand = Plus / Minus Query: 85 ataaattgcagaggagatagtttgaaaacttcagaaactgtctgagggaattgtagttca 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5465 ataaattgcagaggagatagtttgaaaacttcagaaactgtctgagggaattgtagttca 5406 Query: 145 ttcgagtctaacaattcgatatttccttccgtatctttcgtgatacttctgaaggtaaca 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5405 ttcgagtctaacaattcgatatttccttccgtatctttcgtgatacttctgaaggtaaca 5346 Query: 205 gtagaagctttttttatagccttttcagctttgacattttgagcctttctttctaaattc 264 ||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5345 gtagaagctttcttcagagccttttcagctttgacattttgagcctttctttctaaattc 5286 Query: 265 atcatatccttccacacagtgtttctttcccacacaacgtgttctctcaaatgaagggaa 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5285 atcatatccttccacacagtgtttctttcccacacaacgtgttctctcaaatgaagggaa 5226 Query: 325 agctctctttcagcttcttggaagttaaagacctcatgttgagggtccattaatccaata 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5225 agctctctttcagcttcttggaagttaaagacctcatgttgagggtccattaatccaata 5166 Query: 385 gcttttgcatacatgactatgacttcattgatgtcattagataaattctcaatggtgtgt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5165 gcttttgcatacatgactatgacttcattgatgtcattagataaattctcaatggtgtgt 5106 Query: 445 tcattgaacacatgcgatttctttgataaactctttaaataatcggtcttgatattacta 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5105 tcattgaacacatgcgatttctttgataaactctttaaataatcggtcttgatattacta 5046 Query: 505 tccaaagatttatcgaattttttgcagatcttggcaaaaccagtttgattcaactcgata 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5045 tccaaagatttatcgaattttttgcagatcttggcaaaaccagtttgattcaactcgata 4986 Query: 565 aaagattttaattctgaaagttgagtgaaacaagcaacgattctcttcttcaaagtaatc 624 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4985 aaagattttaattctgaaagttgagtgaaacaggcaacgattctcttcttcaaagtaatc 4926 Query: 625 tgttgttccattataggatcagtagtggtgaaatcagttaccctggacagcgtttggaag 684 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4925 tgttgttccataataggatcagtagtggtgaaatcagttaccctggacagcg-ttggaag 4867 Query: 685 tttttcacctggttatgggaatgcatgagccctagatcctactggaacagttc 737 | ||||| ||||| || |||||||||||| |||||||||||||| | |||||| Sbjct: 4866 tatttca-ctggtaat-ggaatgcatgag-cctagatcctactgaaccagttc 4817 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8266 Number of Sequences: 1807 Number of extensions: 8266 Number of successful extensions: 103 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)