BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZB12FM1.SCF screened BAC_end (980 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1400 305 9e-83 >3x_Contig1400 Length = 8536 Score = 305 bits (154), Expect = 9e-83 Identities = 160/162 (98%) Strand = Plus / Plus Query: 86 tgtgttttgtaattcgtagatgaaccacgtcacggtgatccatagtagagtggcgataat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8375 tgtgttttgtaattcgtagatgaaccacgtcacggtgatccatagtagagtggcgataat 8434 Query: 146 cgttaatgcgatgaaatggatatttttggttaaatagatctgcgatcccaacacgcaaag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8435 cgttaatgcgatgaaatggatatttttggttaaatagatctgcgatcccaacacgcaaag 8494 Query: 206 caatagtgcaaacgatatatgagtagcaatgatcaattgagg 247 || |||||||||||| |||||||||||||||||||||||||| Sbjct: 8495 cattagtgcaaacgagatatgagtagcaatgatcaattgagg 8536 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6781 Number of Sequences: 1807 Number of extensions: 6781 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 980 length of database: 10,358,551 effective HSP length: 16 effective length of query: 964 effective length of database: 10,329,639 effective search space: 9957771996 effective search space used: 9957771996 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)