BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZC04FM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1617 1154 0.0 >3x_Contig1617 Length = 15119 Score = 1154 bits (582), Expect = 0.0 Identities = 646/658 (98%), Gaps = 7/658 (1%) Strand = Plus / Plus Query: 91 gtctagatctgctagagtcacttggttttatgataggaatttccttagttttaattgatt 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34 gtctagatctgctagagtcacttggttttatgataggaatttccttagttttaattgatt 93 Query: 151 caaattttgatctgacctcttcaatctcttcttcagcttcttcttcttcgttagaatctg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 caaattttgatctgacctcttcaatctcttcttcagcttcttcttcttcgttagaatctg 153 Query: 211 agaactcttctctttgggtcttgttctctaaattagatggtttcttttgtcccttctttt 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 agaactcttctctttgggtcttgttctctaaattagatggtttcttttgtcccttctttt 213 Query: 271 cagcccaaagttgagctggtgacttttcattcttgaaacccttgatcaccttatcgtcgc 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 cagcccaaagttgagctggtgacttttcattcttgaaacccttgatcaccttatcgtcgc 273 Query: 331 tatcgtttcctgatgattgagctgaggaagaactctttggtcccaagactttgttgtatt 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 tatcgtttcctgatgattgagctgaggaagaactctttggtcccaagactttgttgtatt 333 Query: 391 ctgcatccctctttagcttggattcttgctttaatttagcaatctcagattgaggatcaa 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ctgcatccctctttagcttggattcttgctttaatttagcaatctcagattgaggatcaa 393 Query: 451 tctttttgtcgtaattaggccccgaaacaactagacggggatcttctttactgttttctt 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 tctttttgtcgtaattaggccccgaaacaactagacggggatcttctttactgttttctt 453 Query: 511 cagcaatcactttttgtagatcaactttaccaattggtttccaggaagaagaatttggtt 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cagcaatcactttttgtagatcaactttaccaattggtttccaggaagaagaatttggtt 513 Query: 571 ctagtggtttcttgtcg-aatcacgttctttcaactctggttcaccccattcatcgtcct 629 ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 514 ctagtggtttcttgtcgaaatcacgttcttccaactctggttcaccccattcatcgtcct 573 Query: 630 ttctacctttgctcttctcagtctttggggggagaaacgaatctttcttgatgggaaccg 689 | ||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||| || Sbjct: 574 tcttacctctgctcttctcagtcttt-gggggagaaacggatc-ttcttgatgggaa-cg 630 Query: 690 atggtgtagggttccttttgctcagattgtcctggatgaaacactggactggtttctt 747 |||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 631 atggtgta-ggttccttttgctcagattgt-ctggatgaaacact-gactggtttctt 685 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8368 Number of Sequences: 1807 Number of extensions: 8368 Number of successful extensions: 158 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)