BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZC11FM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1687 1245 0.0 >3x_Contig1687 Length = 12800 Score = 1245 bits (628), Expect = 0.0 Identities = 710/732 (96%), Gaps = 4/732 (0%) Strand = Plus / Plus Query: 87 tagatgaagtagaggtaattaaagtactgtcaggagtagttgcagtagaggaacttgatt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10515 tagatgaagtagaggtaattaaagtactgtcaggagtagttgcagtagaggaacttgatt 10574 Query: 147 ggacagaggaagttgcactttgagattaagtggaatctgtgtttgcttccaaaatactct 206 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10575 ggacagaggaagttgcactttgagaagaagtggaatctgtgtttgcttccaaaatactct 10634 Query: 207 ttacttgggctacgtacggttcaccatcaacctgattggtaaatccttgagatgcatccc 266 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10635 ttacttgggcaacgtatggttcaccatcaacctgattggtaaatccttgagatgcatccc 10694 Query: 267 atagcattataccaccgaaatgtgagttctcaccaattgtttgaacggtggattttaata 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10695 atagcattataccaccgaaatgtgagttctcaccaattgtttgaacggtggattttaata 10754 Query: 327 gacttaagtcggaaatataaccagaaccagcagcggaagcagcacctggcagacccaagt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10755 gacttaagtcggaaatataaccagaaccagcagcggaagcagcacctggcagacccaagt 10814 Query: 387 acaatttaatatccttatttggagaagtgttttcaacgaagtcagcccaagtatcccaat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10815 acaatttaatatccttatttggagaagtgttttcaacgaagtcagcccaagtatcccaat 10874 Query: 447 tgaattgtttatcaacattacagtagttgttgtagaattgaacaaaggcgatatcaatgt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10875 tgaattgtttatcaacattacagtagttgttgtagaattgaacaaaggcgatatcaatgt 10934 Query: 507 cagcgttagccaaggcatcacccacggaggcatctgggtagacacattgaggagcagctg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10935 cagcgttagccaaggcatcacccacggaggcatctgggtagacacattgaggagcagctg 10994 Query: 567 ctaagtaataatcttttgatccctttgcatacaatgatcttagtttagtagccaaactag 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10995 ctaagtaataatcttttgatccctttgcatacaatgatcttagtttagtagccaaactag 11054 Query: 627 cgtatccggtttggattattgttttcgatatcgaaatcgaaaccatcgacgacagcagtg 686 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11055 cgtatccgg-ttggattattgttttcgatatcgaaatcgaaaccatcgacgacagcagtg 11113 Query: 687 gcgaatggtctttcaacattgtctgcggtaccttcacccaaagttattcaccaaggtagt 746 ||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||| Sbjct: 11114 tcgaatggtctttcaacattgtctgcggtaccttca-ccaaaggtattccacaaggtagt 11172 Query: 747 aacaaattctttagccctgcttggcgtcagtaaaacctttgaatccaatggccccaccta 806 | ||||||||| || |||| || ||||||||||||| | |||||||||| ||||||| Sbjct: 11173 agcaaattcttcag-cctggctgtcgtcagtaaaaccatatgatccaatggcaccaccta 11231 Query: 807 atggacaaaaac 818 || ||||||||| Sbjct: 11232 at-gacaaaaac 11242 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6348 Number of Sequences: 1807 Number of extensions: 6348 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)