BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC36ZD01FM1.SCF screened BAC_end
         (913 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1769                                                        1457   0.0  

>3x_Contig1769 
          Length = 25795

 Score = 1457 bits (735), Expect = 0.0
 Identities = 808/826 (97%), Gaps = 5/826 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   tgcaaagaaggacatataattagtgaaatcagtgcttatttgaccggaaaatgttgggaa 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4780 tgcaaagaaggacatataattagtgaaatcagtgcttatttgaccggaaaatgttgggaa 4839

                                                                        
Query: 146  gacctcgaaaggctcaacggcaatgatctattaaaatactgggccccgattgatgcgccc 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4840 gacctcgaaaggctcaacggcaatgatctattaaaatactgggccccgattgatgcgccc 4899

                                                                        
Query: 206  ctcgaaccccctaacaccggtagccttgtgcaaaacaggaagctagcagagctcttgcaa 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4900 ctcgaaccccctaacaccggtagccttgtgcaaaacaggaagctagcagagctcttgcaa 4959

                                                                        
Query: 266  ttggtagcagacaatgggaaagatggattttacaaaggtgtagttgctgaatctataata 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4960 ttggtagcagacaatgggaaagatggattttacaaaggtgtagttgctgaatctataata 5019

                                                                        
Query: 326  gaagaaatgaaaa-cacgc-ggtggtttaatggatatggatgatttggctgctcataaga 383
            ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5020 gaagaaatgaaaaacacgccggtggtttaatggatatggatgatttggctgctcataaga 5079

                                                                        
Query: 384  gtgatttcgttgacccaatatatttggatttcctggagcataaaatttgggaaatacctc 443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5080 gtgatttcgttgacccaatatatttggatttcctggagcataaaatttgggaaatacctc 5139

                                                                        
Query: 444  caaactctcaagggctcgtagttttacttgcattaggaataataagagagcttgacaacc 503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5140 caaactctcaagggctcgtagttttacttgcattaggaataataagagagcttgacaacc 5199

                                                                        
Query: 504  agaaattgattaatctgcactcaatgcaaagaaattctgtggagtatttacacatgctca 563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5200 agaaattgattaatctgcactcaatgcaaagaaattctgtggagtatttacacatgctca 5259

                                                                        
Query: 564  ttgaatgcctcaagttagccttttatgattcagacgaatatgtgtctgaccctaattgtc 623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5260 ttgaatgcctcaagttagccttttatgattcagacgaatatgtgtctgaccctaattgtc 5319

                                                                        
Query: 624  aggaagccgacatcctacatcgattactctcaaaggactatttaaagagtcgtgcaaagc 683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5320 aggaagccgacatcctacatcgattactctcaaaggactatttaaagagtcgtgcaaagc 5379

                                                                        
Query: 684  tattcagccccagtggtatcattgactcttctgttatcaaacatggagttccgaacgaag 743
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5380 tattcagccccagtggtatcattgactcttctgttatcaaacatggagttccgaacgaag 5439

                                                                        
Query: 744  atttcaatcagtcggacacagtatattttaccgtaagtgacccatatggggatgtgacat 803
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5440 atttcaatcagtcggacacagtatattttaccgtaagtgacccatatgggaatgtgacat 5499

                                                                        
Query: 804  cgttcataaaactc-ttgnatgatggtttaggttcttgtattgtggcaccgactttccgg 862
            ||||||| |||||| ||| |||||||||| ||||||||||||||| |||  |||||| | 
Sbjct: 5500 cgttcat-aaactctttgtatgatggttttggttcttgtattgtgccacgaactttcgga 5558

                                                          
Query: 863  agatttgctttaca-aatcgtgggggcaactttttccttacaccag 907
             |||||||| |||| |||||||||| |||||||  |||||||||||
Sbjct: 5559 ggatttgctctacagaatcgtggggccaactttaaccttacaccag 5604


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5287
Number of Sequences: 1807
Number of extensions: 5287
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)