BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZD06FM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1630 1203 0.0 >3x_Contig1630 Length = 14771 Score = 1203 bits (607), Expect = 0.0 Identities = 663/678 (97%), Gaps = 3/678 (0%) Strand = Plus / Minus Query: 87 tagagtgagattaaccaatggtaacattgtttctgcatatatcccaggcgaaggccataa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5364 tagagtgagattaaccaatggtaacattgtttctgcatatatcccaggcgaaggccataa 5305 Query: 147 cgcacaagagcacagtattgtatatgttcgtggaggccgttgccaagatttacctggtgt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5304 cgcacaagagcacagtattgtatatgttcgtggaggccgttgccaagatttacctggtgt 5245 Query: 207 gaaatatcatgttgtccgtggtgccggtgatttggccggtgttgtcaacagaatcagctc 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5244 gaaatatcatgttgtccgtggtgccggtgatttggccggtgttgtcaacagaatcagctc 5185 Query: 267 cagatcgaagtacggtgtgaagaaaccaacaaaggagtaagataccaacagtattatatt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5184 cagatcgaagtacggtgtgaagaaaccaacaaaggagtaagataccaacagtattatatt 5125 Query: 327 ctgaattatcaacataaaatatatacttatgtttataaactagaccttcatgtaaatatg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5124 ctgaattatcaacataaaatatatacttatgtttataaactagaccttcatgtaaatatg 5065 Query: 387 cgaataatctatctactggttgctcaatctttatggccacgtgaccgaaattttgttcgg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5064 cgaataatctatctactggttgctcaatctttatggccacgtgaccgaaattttgttcgg 5005 Query: 447 atggtttttccatcatagaaaagtgctgaaaatttagttaacaacgatttcaacgaaaag 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5004 atggtttttccatcatagaaaagtgctgaaaatttagttaacaacgatttcaacgaaaag 4945 Query: 507 gtgcccctattggaacaaacagaaagatagattcatcatctgcaaggaattgggaaattt 566 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4944 gtgcccctattggaacaaacagaaagaaagattcatcatctgcaaggaattgggaaattt 4885 Query: 567 cgaagagactaaacctgctcagtgttgaggaaacttatcagttgatattgntccaagtca 626 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 4884 cgaagagactaaacctgctcagtgttgaggaaacttacaagttgatattgttccaagtca 4825 Query: 627 attgaagaatagctcatagacttgttcgaaaaaatagcct-gggtgatcacttgtgagcc 685 ||||||||| |||||||||||||||||||||||| ||||| |||||| |||||||||| | Sbjct: 4824 attgaagaaaagctcatagacttgttcgaaaaaaaagcctggggtgaacacttgtgag-c 4766 Query: 686 cttct-atatcaatacatattaatgttacacctttaaccatacaacctattggttcaaaa 744 ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| Sbjct: 4765 cttctaatatcaatacataataatgttacaccttaaaccatacaacctattggtccaaaa 4706 Query: 745 gacattacaagaagcttt 762 ||||||| ||||||||| Sbjct: 4705 gacattaacagaagcttt 4688 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7249 Number of Sequences: 1807 Number of extensions: 7249 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)