BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZD07RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1522 1120 0.0 >3x_Contig1522 Length = 7810 Score = 1120 bits (565), Expect = 0.0 Identities = 618/633 (97%), Gaps = 2/633 (0%) Strand = Plus / Minus Query: 47 ttattttagataaacaaatcgaacaatcctctaattccgtcccgctggtcatcttttgca 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6383 ttattttagataaacaaatcgaacaatcctctaattccgtcccgctggtcatcttttgca 6324 Query: 107 aggctttcatcttttgaatagcttctttattgaatgcattagctttccttctccaagatt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6323 aggctttcatcttttgaatagcttctttattgaatgcattagctttccttctccaagatt 6264 Query: 167 tattgagctccactctcattttaacacacctgtaaatttcttccgcaccaccccggaagt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6263 tattgagctccactctcattttaacacacctgtaaatttcttccgcaccaccccggaagt 6204 Query: 227 ctaatccgagttgtaatatatcgccgtcctttaacagaaaatccttggacatagtagctg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6203 ctaatccgagttgtaatatatcgccgtcctttaacagaaaatccttggacatagtagctg 6144 Query: 287 gctgagaaagtctttgatgattcaagaacgtccctgatgatgatttgacatctttcacaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6143 gctgagaaagtctttgatgattcaagaacgtccctgatgatgatttgacatctttcacaa 6084 Query: 347 acctatttccattatcgtcaactttgaaaacaccatgtgtccttgagacgactttactct 406 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6083 accaatttccattatcgtcaactttgaaaacaccatgtgtccttgagacgactttactct 6024 Query: 407 tgaatacggctggatggaacggttcgggaatagaagaaatggcctctctgaccttttctg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6023 tgaatacggctggatggaacggttcgggaatagaagaaatggcctctctgaccttttctg 5964 Query: 467 tgtaccttccgattaccaactgagaaccaggaccagcagttcttatgatcggatcaaaat 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5963 tgtaccttccgattaccaactgagaaccaggaccagcagttcttatgatcggatcaaaat 5904 Query: 527 agaaaccggggttaccagccgatgagttgtct-ttaatgcggtcaatctttaagtgaatt 585 |||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||| Sbjct: 5903 agaaaccggggttaccagccgatgagttgtctataaatgcggtcaatcttaaagtgaata 5844 Query: 586 atccgtttttattcttaccatttcttacagtttcattatttgcagctt-cggcttggccc 644 |||||||||||| ||||| |||||| |||||||||| || |||||||| ||||| ||||| Sbjct: 5843 atccgtttttatccttacgatttctaacagtttcatcatctgcagcttccggctgggccc 5784 Query: 645 aatcaggtgcaaagtctaaattcaacaatggcg 677 |||||||||||||||||| || |||| |||||| Sbjct: 5783 aatcaggtgcaaagtctagatgcaacgatggcg 5751 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7554 Number of Sequences: 1807 Number of extensions: 7554 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)