BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZD08FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1337 1332 0.0 >3x_Contig1337 Length = 7771 Score = 1332 bits (672), Expect = 0.0 Identities = 745/759 (98%), Gaps = 8/759 (1%) Strand = Plus / Minus Query: 89 catctggtgataccaacggtatgattaaagtctgggatttagttaaacgtaattgtcaat 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7670 catctggtgataccaacggtatgattaaagtctgggatttagttaaacgtaattgtcaat 7611 Query: 149 gcactattcaggaacatactacagctgttagagggctagatttccgtgtcactgatgaag 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7610 gcactattcaggaacatactacagctgttagagggctagatttccgtgtcactgatgaag 7551 Query: 209 aaaagggaacgctgcagttattatctggtggtagagacaatatcttaaatctcttcgagt 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7550 aaaagggaacgctgcagttattatctggtggtagagacaatatcttaaatctcttcgagt 7491 Query: 269 ttaattcgacgaaaaagtataagctactgaagaccatccctgtcatagaacaggtggaat 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7490 ttaattcgacgaaaaagtataagctactgaagaccatccctgtcatagaacaggtggaat 7431 Query: 329 cgtgtggatttacgcaggacccggatgtggtttactcagccggtggtggtgccatttacc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7430 cgtgtggatttacgcaggacccggatgtggtttactcagccggtggtggtgccatttacc 7371 Query: 389 aattagtgtccttgtcaacaggaagagtattaaagaaaacagcaaaacctattgaagagc 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7370 aattagtgtccttgtcaacaggaagagtattaaagaaaacagcaaaacctattgaagagc 7311 Query: 449 tatttattattggtacactatgtatcctgaacggaactaagcagtacttggtattttcag 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7310 tatttattattggtacactatgtatcctgaacggaactaagcagtacttggtattttcag 7251 Query: 509 atcaaactttgttcctaatagatgttgaatcagctttacaatcggaatctgaagtaattg 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7250 atcaaactttgttcctaatagatgttgaatcagctttacaatcggaatctgaagtaattg 7191 Query: 569 aagtggaaaataagattgcaggtaatcatggtaccattgcagatataagattcgttggtc 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7190 aagtggaaaataagattgcaggtaatcatggtaccattgcagatataagattcgttggtc 7131 Query: 629 caaaacgggataaattagcattagctactaactctnctactcttagaat-attccaaccc 687 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 7130 caaaacgggataaattagcattagctactaactctcctactcttagaataattccaaccc 7071 Query: 688 caactttcttcggaggaa-agttcgaaaatgggggagaacaaagaaacatttcctattga 746 |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7070 caac-ttcttcggaggaagagttcgaaaat-ggggagaacaaagaaacatttcctattga 7013 Query: 747 agtaaagatgtacgaaggtcataccgatctacttcactctttggatgccacc-ctgatgg 805 ||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 7012 agtaaagatgtacgagggtcatacggatctactcaactctttggatgccaccgctgatgg 6953 Query: 806 tctctggggttgctaca-cctccaaggattcacagcgtt 843 ||||| ||||||||||| | |||||||| |||||||||| Sbjct: 6952 tctct-gggttgctacagcatccaagga-tcacagcgtt 6916 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6077 Number of Sequences: 1807 Number of extensions: 6077 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)