BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZD10RM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig660 961 0.0 >3x_Contig660 Length = 1656 Score = 961 bits (485), Expect = 0.0 Identities = 545/556 (98%), Gaps = 8/556 (1%) Strand = Plus / Minus Query: 48 ttcagattcctctctgaaattgatggtcttcagtgcacgttcaacgatctcacgggcttt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 ttcagattcctctctgaaattgatggtcttcagtgcacgttcaacgatctcacgggcttt 756 Query: 108 ttcgacttcacttagttgtaaatggaaagccatgtagttcatccataccacggaagagtt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ttcgacttcacttagttgtaaatggaaagccatgtagttcatccataccacggaagagtt 696 Query: 168 tggattacccatgattaaacgttcaaagtcgcctacggattctggaatcctggtgttgat 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 tggattacccatgattaaacgttcaaagtcgcctacggattctggaatcctggtgttgat 636 Query: 228 atcaacagtcttatcttgaacaatctgagtcttcttcttcttttgcttcctagatttaat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 atcaacagtcttatcttgaacaatctgagtcttcttcttcttttgcttcctagatttaat 576 Query: 288 gaagtcctcatcttcttcggaggattcttcttcgtcttgagcttggtcaaggatgcttgc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 gaagtcctcatcttcttcggaggattcttcttcgtcttgagcttggtcaaggatgcttgc 516 Query: 348 agtccaatcgaatccggtactcaatgaaagtccgtcagtgctgactggggcagaattttt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 agtccaatcgaatccggtactcaatgaaagtccgtcagtgctgactggggcagaattttt 456 Query: 408 aggtctagttgtgtcttccgcttctgaatcggaatgtccaaattgagcatcgtccatgat 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 aggtctagttgtgtcttccgcttctgaatcggaatgtccaaattgagcatcgtccatgat 396 Query: 468 ctcatcttggtcttcatctttgtcttcatcttttgtcg-aagcatcgctttccttcttgt 526 ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| || Sbjct: 395 ctcatcttggtcttcatctttgtcttcatcttt-gtcggaagcatcgctttccttct-gt 338 Query: 527 c--tttttcatatcgatatctagatcatctacacctttcgagctcttctttctttttcat 584 | | || ||||||||||||||||||||||||||| |||||||||||| ||||| ||||| Sbjct: 337 ccatcttccatatcgatatctagatcatctacacc-ttcgagctcttc-ttcttcttcat 280 Query: 585 tacctttcttcaacgg 600 |||| ||||||||||| Sbjct: 279 tacc-ttcttcaacgg 265 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,707 Number of Sequences: 1807 Number of extensions: 10707 Number of successful extensions: 120 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)