BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZD11RM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1313 1185 0.0 >3x_Contig1313 Length = 8010 Score = 1185 bits (598), Expect = 0.0 Identities = 639/650 (98%), Gaps = 2/650 (0%) Strand = Plus / Plus Query: 70 gattaagaaattgacacttttaaaaggctcctcgatcaccttaaacaggctataatcgat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 gattaagaaattgacacttttaaaaggctcctcgatcaccttaaacaggctataatcgat 61 Query: 130 aatgtcagctgaagaagcaaacacgagatctaaagaaccaacgtcaattttctctgtccc 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 aatgtcagctgaagaagcaaacacgagatctaaagaaccaacgtcaattttctctgtccc 121 Query: 190 tgccgaaactatattagcttttttcattgaaccttcgacgagtaaaacgttgtctctatc 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 tgccgaaactatattagcttttttcattgaaccttcgacgagtaaaacgttgtctctatc 181 Query: 250 tagtaatagtattttatcttcatctttcacatcattgataataaagttacactcaaaaaa 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 tagtaatagtattttatcttcatctttcacatcattgataataaagttacactcaaaaaa 241 Query: 310 cccatacccctgcacatcttgctctactacccttacatggttctttttgaagtaatcaat 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 cccatacccctgcacatcttgctctactacccttacatggttctttttgaagtaatcaat 301 Query: 370 gtaaagtaatttcccggattgccatgttatagtgtcaatatcgcaacctagttgtaacag 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 gtaaagtaatttcccggattgccatgttatagtgtcaatatcgcaacctagttgtaacag 361 Query: 430 aacgttgaagtctaacttgaaaaaagccctctcgcgcttatgcaatgataacacgcacat 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 aacgttgaagtctaacttgaaaaaagccctctcgcgcttatgcaatgataacacgcacat 421 Query: 490 gagatgcattgacgttacaaatcctataagatcattggtactggagtaagtgagtttagc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 gagatgcattgacgttacaaatcctataagatcattggtactggagtaagtgagtttagc 481 Query: 550 agtaaactttgggggtacgttatcaaatttatatgaacataccaactcgatatcatactt 609 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 482 agtaaactttgggggtacgttatcaagtttatatgaacataccaactcgatatcatactt 541 Query: 610 ttcaactgtctggtggtagtggaaatccatggagtttatctcttcagaagcaa-gcattt 668 |||| |||||||||||||||||||||||||||||| ||||||| |||| |||| |||| Sbjct: 542 ttcagctgtctggtggtagtggaaatccatggagtatatctctccagaggcaaggcatag 601 Query: 669 aatgcacgtttcatttttatcagaacactttttggttaggtattactaac 718 ||||||||| |||||||||||||||||| || |||||||||||||||||| Sbjct: 602 aatgcacgtatcatttttatcagaacac-ttctggttaggtattactaac 650 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7986 Number of Sequences: 1807 Number of extensions: 7986 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)