BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZE01RM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1641 1189 0.0 >3x_Contig1641 Length = 13261 Score = 1189 bits (600), Expect = 0.0 Identities = 712/740 (96%), Gaps = 7/740 (0%) Strand = Plus / Minus Query: 43 ctttactgatacttcgatctcttatatcgttggaataatcatcgactgcataaacaactc 102 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 3815 ctttactgatacttcgatctctcaaatcgttggaataatcatcgactgcataaacaactc 3756 Query: 103 tatcctgaaaatataaggatttaggttgtctccgtatatttaaacttgtacatatgtaat 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3755 tatcctgaaaatataaggatttaggttgtctccgtatatttaaacttgtacatatgtaat 3696 Query: 163 aatctttgtaaaattatactatatttaagatttatacccatctttggaccaccactgcat 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3695 aatctttgtaaaattatactatatttaagatttatacccatctttggaccaccactgcat 3636 Query: 223 tgcataggtcttgatctttcaaagtggagtcaaattcgtcaatgggttttacgggaaatg 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3635 tgcataggtcttgatctttcaaagtggagtcaaattcgtcaatgggttttacgggaaatg 3576 Query: 283 catggcttattgtaaatgggcgcatttctgctgtgttagctttaacatgctggtacaaga 342 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3575 catggcttagtgtaaatgggcgcatttctgctgtgttagctttaacatgctggtacaaga 3516 Query: 343 atctgatggtatctgtagagttacaacgtaacacctccctcttcccagaagcatatctga 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3515 atctgatggtatctgtagagttacaacgtaacacctccctcttcccagaagcatatctga 3456 Query: 403 tctgtacactagtgtctccctttagctcgtcatctggcgatttttctttgatttcagtcc 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3455 tctgtacactagtgtctccctttagctcgtcatctggcgatttttctttgatttcagtcc 3396 Query: 463 ctactggagtagattcggcaggcgatgctgattgagagtttactgcatcaccaggaatgg 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3395 ctactggagtagattcggcaggcgatgctgattgagagtttactgcatcaccaggaatgg 3336 Query: 523 gtgagcccaatctcttacctgttccttggaagccactcacttttctcttaagtggaacgt 582 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3335 gtgagcccaatctcttacctgttccttggaagccactcacttttctcttaggtggaacgt 3276 Query: 583 aaggctctttcaac-ttttatataccgtgacatcgacctcttgttcgaatt-gacgttca 640 ||||||||| |||| ||||||| ||||||||||||||||||||| |||||| ||||| || Sbjct: 3275 aaggctcttccaactttttatagaccgtgacatcgacctcttgtccgaattcgacgtcca 3216 Query: 641 attactgcaaaggagctctttccttggtttag-tctttcaaaaagaaactattttttggg 699 || ||||||||||||||| ||||||||||||| ||||||||| |||||||||||| |||| Sbjct: 3215 ataactgcaaaggagctc-ttccttggtttagttctttcaaatagaaactattttctggg 3157 Query: 700 tcgtcgtaaccatttttttttgccattaccgacttgggaatcattttttccaaaaccgta 759 |||||||||| | | | |||||||| |||||||| |||||| | ||||||||| |||| Sbjct: 3156 tcgtcgtaacga-tatagtttgccatcaccgactt-ggaatccatctttccaaaa-cgta 3100 Query: 760 ttttcccttgtcaccttttt 779 ||||||||||||| ||||| Sbjct: 3099 atttcccttgtcactttttt 3080 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9004 Number of Sequences: 1807 Number of extensions: 9004 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)