BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC36ZE03FM1.SCF screened BAC_end
         (909 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1759                                                        1542   0.0  

>3x_Contig1759 
          Length = 25622

 Score = 1542 bits (778), Expect = 0.0
 Identities = 815/825 (98%), Gaps = 2/825 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    tatttcgagccgggtatctcatgagagacaatagtatatccattcactgaaactaccaaa 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10032 tatttcgagccgggtatctcatgagagacaatagtatatccattcactgaaactaccaaa 10091

                                                                         
Query: 147   tcagctctttcatctaacatcaaggggcatcggaatttgattctcttgatttcctttgtt 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10092 tcagctctttcatctaacatcaaggggcatcggaatttgattctcttgatttcctttgtt 10151

                                                                         
Query: 207   cttttcactttcgattttatgtacgatgcattaatgggattagtactagggccgtgtgag 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10152 cttttcactttcgattttatgtacgatgcattaatgggattagtactagggccgtgtgag 10211

                                                                         
Query: 267   gatagccatgattgtgcttcgttgatctttgaaccccatttcaagatatctgcatacata 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10212 gatagccatgattgtgcttcgttgatctttgaaccccatttcaagatatctgcatacata 10271

                                                                         
Query: 327   gaatcgtcaaatggtttatcttcagaaccaatgaaaaatgtgacaaaattgatataatag 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10272 gaatcgtcaaatggtttatcttcagaaccaatgaaaaatgtgacaaaattgatataatag 10331

                                                                         
Query: 387   tcatataaatcgtcgacaacttttctaagacgagatctgctgtcaacgttcaagaactca 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10332 tcatataaatcgtcgacaacttttctaagacgagatctgctgtcaacgttcaagaactca 10391

                                                                         
Query: 447   gccggtttgtcgtcatcagtaaaaaaaaatattttcttgttagtcagttgcttctgtcct 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10392 gccggtttgtcgtcatcagtaaaaaaaaatattttcttgttagtcagttgcttctgtcct 10451

                                                                         
Query: 507   tctatcggttgtaaaaatgtttctctaactttgatcaatactggagaaagttcaattggg 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10452 tctatcggttgtaaaaatgtttctctaactttgatcaatactggagaaagttcaattggg 10511

                                                                         
Query: 567   ttgtttgggtctgcgataggaatctcatctttgagaagtattctatcctgttctatatct 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10512 ttgtttgggtctgcgataggaatctcatctttgagaagtattctatcctgttctatatct 10571

                                                                         
Query: 627   tccaacagatcagatacacgtttcatattcttatagttcacatcacgtaacggtattagt 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10572 tccaacagatcagatacacgtttcatattcttatagttcacatcacgtaacggtattagt 10631

                                                                         
Query: 687   tcatacacattatcttcagcgttaggatgagaacagttgtaaatataacagccaactgca 746
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10632 tcatacacattatcttcagcgttaggatgagaacagttgtaaatataacagccaactgca 10691

                                                                         
Query: 747   gtacttggcataacaactaccaattgtgacattaaatcatttagtgaatctaaaatctct 806
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10692 gtacttggcataacaactaccaattgtgacattaaatcatttagtgaatctaaaatctct 10751

                                                                         
Query: 807   aaga-ttgaatnttgccttccagatcagggtttgaaagatacatcgggggtgttagctgg 865
             |||| |||||| |||||| | ||||||||||||||||||||||||| |||||||||||| 
Sbjct: 10752 aagagttgaattttgcctccaagatcagggtttgaaagatacatcgtgggtgttagctga 10811

                                                          
Query: 866   atac-aaacacgataccatcatgtgctttgtaacgtcttcatttc 909
             |||| ||||||||||||||||||||||| ||| ||||| ||||||
Sbjct: 10812 atacaaaacacgataccatcatgtgcttcgtagcgtctccatttc 10856


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7430
Number of Sequences: 1807
Number of extensions: 7430
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)