BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZF03FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig627 1479 0.0 >3x_Contig627 Length = 1782 Score = 1479 bits (746), Expect = 0.0 Identities = 831/854 (97%), Gaps = 4/854 (0%) Strand = Plus / Plus Query: 87 atctaaattgtggtcgtgtagaagcctcaatcaaggtatttaaaaaagttcttgagctag 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 atctaaattgtggtcgtgtagaagcctcaatcaaggtatttaaaaaagttcttgagctag 192 Query: 147 acgaaaat-accatttcgcctggtatttcctcgcaatcgctctttcagcattaggagaat 205 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 acgaaaatcaccatttcgcctggtatttcctcgcaatcgctctttcagcattaggagaat 252 Query: 206 ttgatagaagtattgaatttttcgagaggttagtaaatactgatgattctgaagaatgtt 265 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 ttgatagaagtattgaaattttcgagaggttagtaaatactgatgattctgaagaatgtt 312 Query: 266 ttatggtctctgagatatctacactcatagattatgccacagaactatattcccgaggat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 ttatggtctctgagatatctacactcatagattatgccacagaactatattcccgaggat 372 Query: 326 atttgttgaaagcaattgatgtatcttctaaagccatttcgaaaattgaacatgtgatat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 atttgttgaaagcaattgatgtatcttctaaagccatttcgaaaattgaacatgtgatat 432 Query: 386 gcttaatatctgcgaacttacagaatgtatggatttctcttagtaaagcgttaagaatat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gcttaatatctgcgaacttacagaatgtatggatttctcttagtaaagcgttaagaatat 492 Query: 446 ttgttatcattgaatctcagctcgataatttgcctattgattctctcgtaaagatcttca 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 ttgttatcattgaatctcagctcgataatttgcctattgattctctcgtaaagatcttca 552 Query: 506 gcactgtacctatgtcaactgaagttactgagcttactcttgatggaatttcgttggata 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 gcactgtacctatgtcaactgaagttactgagcttactcttgatggaatttcgttggata 612 Query: 566 caattttggctgatgaatcttctgataatatgactattgcccttaagttcgtcgttctat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 caattttggctgatgaatcttctgataatatgactattgcccttaagttcgtcgttctat 672 Query: 626 ctgctaagtacccccttcttatggacaatttcaattccatgtctaagacagttcatgccg 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 ctgctaagtacccccttcttatggacaatttcaattccatgtctaagacagttcatgccg 732 Query: 686 gtttatggtacaatcttcgctgcgctgaactgttgggactattaaccgtttcggaagata 745 |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 733 gtttatggtacaatctcggctgcgctgaactgttgggactattaaccgtttcggaggata 792 Query: 746 gtttttcgtgatgctgctattcatgcatttaaaagcttgattcgctgccagtcgaataac 805 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 793 g-ttttcgtgatgctgctattcatgcatttaaaagctcgattcgctgccagtcgaataac 851 Query: 806 acagaatcatggattagtttaggtatc-ccacaatgaatggcagcttccaggttttccca 864 |||||||||||||| ||||||||||| | |||||||||| ||||| |||||||| || | Sbjct: 852 acagaatcatggataggtttaggtatcgcaacaatgaatgtcagctaccaggtttcccaa 911 Query: 865 catgggttcataaaagcaatggcgctaatttccata-taacagggagctggtattgtatg 923 ||| | |||||||||||||| ||||||| ||||| | |||||| ||||||||||||||| Sbjct: 912 cattgtttcataaaagcaattgcgctaaattccagagaaacaggaagctggtattgtatg 971 Query: 924 gccatgttagctct 937 |||||||||||||| Sbjct: 972 gccatgttagctct 985 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5983 Number of Sequences: 1807 Number of extensions: 5983 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)