BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC36ZF03FM1.SCF screened BAC_end
         (967 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig627                                                         1479   0.0  

>3x_Contig627 
          Length = 1782

 Score = 1479 bits (746), Expect = 0.0
 Identities = 831/854 (97%), Gaps = 4/854 (0%)
 Strand = Plus / Plus

                                                                       
Query: 87  atctaaattgtggtcgtgtagaagcctcaatcaaggtatttaaaaaagttcttgagctag 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atctaaattgtggtcgtgtagaagcctcaatcaaggtatttaaaaaagttcttgagctag 192

                                                                       
Query: 147 acgaaaat-accatttcgcctggtatttcctcgcaatcgctctttcagcattaggagaat 205
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 acgaaaatcaccatttcgcctggtatttcctcgcaatcgctctttcagcattaggagaat 252

                                                                       
Query: 206 ttgatagaagtattgaatttttcgagaggttagtaaatactgatgattctgaagaatgtt 265
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttgatagaagtattgaaattttcgagaggttagtaaatactgatgattctgaagaatgtt 312

                                                                       
Query: 266 ttatggtctctgagatatctacactcatagattatgccacagaactatattcccgaggat 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttatggtctctgagatatctacactcatagattatgccacagaactatattcccgaggat 372

                                                                       
Query: 326 atttgttgaaagcaattgatgtatcttctaaagccatttcgaaaattgaacatgtgatat 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atttgttgaaagcaattgatgtatcttctaaagccatttcgaaaattgaacatgtgatat 432

                                                                       
Query: 386 gcttaatatctgcgaacttacagaatgtatggatttctcttagtaaagcgttaagaatat 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcttaatatctgcgaacttacagaatgtatggatttctcttagtaaagcgttaagaatat 492

                                                                       
Query: 446 ttgttatcattgaatctcagctcgataatttgcctattgattctctcgtaaagatcttca 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttgttatcattgaatctcagctcgataatttgcctattgattctctcgtaaagatcttca 552

                                                                       
Query: 506 gcactgtacctatgtcaactgaagttactgagcttactcttgatggaatttcgttggata 565
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gcactgtacctatgtcaactgaagttactgagcttactcttgatggaatttcgttggata 612

                                                                       
Query: 566 caattttggctgatgaatcttctgataatatgactattgcccttaagttcgtcgttctat 625
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 caattttggctgatgaatcttctgataatatgactattgcccttaagttcgtcgttctat 672

                                                                       
Query: 626 ctgctaagtacccccttcttatggacaatttcaattccatgtctaagacagttcatgccg 685
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ctgctaagtacccccttcttatggacaatttcaattccatgtctaagacagttcatgccg 732

                                                                       
Query: 686 gtttatggtacaatcttcgctgcgctgaactgttgggactattaaccgtttcggaagata 745
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 733 gtttatggtacaatctcggctgcgctgaactgttgggactattaaccgtttcggaggata 792

                                                                       
Query: 746 gtttttcgtgatgctgctattcatgcatttaaaagcttgattcgctgccagtcgaataac 805
           | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 793 g-ttttcgtgatgctgctattcatgcatttaaaagctcgattcgctgccagtcgaataac 851

                                                                       
Query: 806 acagaatcatggattagtttaggtatc-ccacaatgaatggcagcttccaggttttccca 864
           ||||||||||||||  ||||||||||| | |||||||||| ||||| |||||||| || |
Sbjct: 852 acagaatcatggataggtttaggtatcgcaacaatgaatgtcagctaccaggtttcccaa 911

                                                                       
Query: 865 catgggttcataaaagcaatggcgctaatttccata-taacagggagctggtattgtatg 923
           ||| | |||||||||||||| ||||||| ||||| |  |||||| |||||||||||||||
Sbjct: 912 cattgtttcataaaagcaattgcgctaaattccagagaaacaggaagctggtattgtatg 971

                         
Query: 924 gccatgttagctct 937
           ||||||||||||||
Sbjct: 972 gccatgttagctct 985


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5983
Number of Sequences: 1807
Number of extensions: 5983
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)