BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZF04FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1714 1037 0.0 >3x_Contig1714 Length = 18873 Score = 1037 bits (523), Expect = 0.0 Identities = 571/583 (97%), Gaps = 3/583 (0%) Strand = Plus / Plus Query: 85 cttttcgttccaaaccacccagacatcgatcttgttcaaggtcctgacggaaaaacttta 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5388 cttttcgttccaaaccacccagacatcgatcttgttcaaggtcctgacggaaaaacttta 5447 Query: 145 cgaattgttgccgttgatgtgggtatgaagtacaaccaaatccgttgtttcgtcaagcgt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5448 cgaattgttgccgttgatgtgggtatgaagtacaaccaaatccgttgtttcgtcaagcgt 5507 Query: 205 ggtgttgaattgttggttgttccatgggattacgacttcaccaccgaagaatatgacggt 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5508 ggtgttgaattgttggttgttccatgggattacgacttcaccaccgaagaatatgacggt 5567 Query: 265 ttgttcatctctaatggtcctggtaatccagccattctgcaggaagtgtccgatagattg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5568 ttgttcatctctaatggtcctggtaatccagccattctgcaggaagtgtccgatagattg 5627 Query: 325 actaaagttttagatgcgaagaagaccccagtcttcggtatctgtttgggtcatcaatta 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5628 actaaagttttagatgcgaagaagaccccagtcttcggtatctgtttgggtcatcaatta 5687 Query: 385 ctaactcgtgcttctggtgcctcaactttgaagatgaagttcggtaacataggtcacaat 444 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5688 ctagctcgtgcttctggtgcctcaactttgaagatgaagttcggtaacagaggtcacaat 5747 Query: 445 attccatgtacttcgactgtctctggtagatgttatatcacttctcaaaaccatggtttc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5748 attccatgtacttcgactgtctctggtagatgttatatcacttctcaaaaccatggtttc 5807 Query: 505 gctgtagatgaaactagtttgaccaatggctggaaatcattgttcaccaacgctaacgat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5808 gctgtagatgaaactagtttgaccaatggctggaaatcattgttcaccaacgctaacgat 5867 Query: 565 ggtttcaatgaagggatttatcactcagagttgccttactttttcgttc-attccatcct 623 |||| |||||||||||||||||||||||||||||||||||| | ||||| |||||||||| Sbjct: 5868 ggttccaatgaagggatttatcactcagagttgccttacttctccgttcaattccatcct 5927 Query: 624 g-attttcttcaggtccaaga-aaactgaattcttgttcgatg 664 | || | || ||||||||||| | ||||||||||||||||||| Sbjct: 5928 gaatctactccaggtccaagagacactgaattcttgttcgatg 5970 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8013 Number of Sequences: 1807 Number of extensions: 8013 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)