BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZG01RM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1772 1134 0.0 >3x_Contig1772 Length = 25851 Score = 1134 bits (572), Expect = 0.0 Identities = 672/696 (96%), Gaps = 7/696 (1%) Strand = Plus / Plus Query: 44 cttgtctgatattgcgcagaagatctgcggaattttcactagcggctggagaatccgctg 103 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 6518 cttgtctgatattgcgcagaagagctgcggaattttcactagcggctggagaatccgctg 6577 Query: 104 tgttcccagcgcgagctgaatcttgagttatagaaccatagttcccagtagaggattgtc 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6578 tgttcccagcgcgagctgaatcttgagttatagaaccatagttcccagtagaggattgtc 6637 Query: 164 cagcaggtgcggtaccggcttctccagctgcttcttcgatatcgtaggagttccctggag 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6638 cagcaggtgcggtaccggcttctccagctgcttcttcgatatcgtaggagttccctggag 6697 Query: 224 cagccaactcttcatcttcagtgtcctcatattcgtcttcatcatctcttccaggtcttg 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6698 cagccaactcttcatcttcagtgtcctcatattcgtcttcatcatctcttccaggtcttg 6757 Query: 284 tgatattgatgtgagttgggatggcgggtttcctgatatcaacatccatttgaggtagcc 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6758 tgatattgatgtgagttgggatggcgggtttcctgatatcaacatccatttgaggtagcc 6817 Query: 344 aaaatggaatagaactgactctgtcgttgagaagtgacgcgacaccgtgaatgaatttag 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6818 aaaatggaatagaactgactctgtcgttgagaagtgacgcgacaccgtgaatgaatttag 6877 Query: 404 aaaacttatgcacaggttcaactaaatgcgagcccactaattctctgacccattctggag 463 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6878 aaaacttaggcacaggttcaactaaatgcgagcccactaattctctgacccattctggag 6937 Query: 464 gctcttgacccatttgagtttgtagtttgacttccaaaacagcgtaagggaatctacaaa 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6938 gctcttgacccatttgagtttgtagtttgacttccaaaacagcgtaagggaatctacaaa 6997 Query: 524 tgtcttttttaagcaactgatttgaatggccaatctacaccaatatccattcttcttcag 583 ||||||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 6998 tgtctttttcaggcaactga-ttgaatggccaatctacaccaatatccattcttctccag 7056 Query: 584 ttacccgttggttctgtcatgaccatcaaagttatcctccctttaccatggacattttca 643 ||| ||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 7057 tta-ccgttggttctgtcatgaccatcaaagttatcctccc-ttaccatggacaattcag 7114 Query: 644 tttctaaagaaattcgcacgcgggcatttccaggcatttgaaaagcagttctggttat-g 702 | ||||||||||| ||||||||||||| ||||||| ||| ||||||||||| ||||| | Sbjct: 7115 tatctaaagaaatacgcacgcgggcatcaccaggcaattggaaagcagttct-gttatag 7173 Query: 703 aaacttcctggccactgggctttaatttcttcttga 738 |||||| ||||||||||| | ||| ||||||||||| Sbjct: 7174 aaactt-ctggccactggtc-ttagtttcttcttga 7207 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8471 Number of Sequences: 1807 Number of extensions: 8471 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)