BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZG06FM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1785 1394 0.0 >3x_Contig1785 Length = 37935 Score = 1394 bits (703), Expect = 0.0 Identities = 803/826 (97%), Gaps = 8/826 (0%) Strand = Plus / Plus Query: 86 ctggctgaggtggagtggtttggccttgagacttgaaccagttaccaggaacgaccaata 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16919 ctggctgaggtggagtggtttggccttgagacttgaaccagttaccaggaacgaccaata 16978 Query: 146 cacctgaagcgatggacctgtcaaagatagccttttcaactttttcaggatctgacccgt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16979 cacctgaagcgatggacctgtcaaagatagccttttcaactttttcaggatctgacccgt 17038 Query: 206 acttggttgcaaattcgggatgcttggaagcgtcaatgttgacagtaaagaacataccag 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17039 acttggttgcaaattcgggatgcttggaagcgtcaatgttgacagtaaagaacataccag 17098 Query: 266 cgattggtggattaatcttgatgtaatcgacttgtggtaggtatttgtacaatgcatcaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17099 cgattggtggattaatcttgatgtaatcgacttgtggtaggtatttgtacaatgcatcaa 17158 Query: 326 tacaacagtcacgcttcttggtgtattcgtgtctcaaaccgatcaaccagtccaagtatc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17159 tacaacagtcacgcttcttggtgtattcgtgtctcaaaccgatcaaccagtccaagtatc 17218 Query: 386 cttcttgaccccagcggttcatggtaccagcgatgatcgattgagtgaaaccagcaggag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17219 cttcttgaccccagcggttcatggtaccagcgatgatcgattgagtgaaaccagcaggag 17278 Query: 446 cttggatggtcatttcttgtaaacttaagatacgggccaagatgtctttggcaccaacga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17279 cttggatggtcatttcttgtaaacttaagatacgggccaagatgtctttggcaccaacga 17338 Query: 506 tccaaccgaatcttgtacctggagctaggaccttggacaaagagtccaatcttaatacac 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17339 tccaaccgaatcttgtacctggagctaggaccttggacaaagagtccaatcttaatacac 17398 Query: 566 gtccctcggtgtcaatagagacgaaagatttttccaagttttgaatgaactctttatgat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17399 gtccctcggtgtcaatagagacgaaagatttttccaagttttgaatgaactctttatgat 17458 Query: 626 cagcgttagatttgacatccctgtttgccggatctttttcgtatttttccatttgcaaga 685 |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 17459 cagcgtaggatttgacaaccctgtttgccggatctttttcgtatttttccatttgcaaga 17518 Query: 686 agtagtatgggtcatccttcatggat-atgaaatcgtgcttttgggcattacgatagatt 744 |||||||||| |||| ||||| ||| ||||||||||||||||||||| ||||||||| | Sbjct: 17519 agtagtatggttcat-cttcaatgataatgaaatcgtgcttttgggcaatacgataga-t 17576 Query: 745 ttcttctttcctatcgaaggataaagatgnaccagtttgggttttgaccagtttggaaca 804 ||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||| Sbjct: 17577 ttcttctttcctatcgaaggataaagatgaaccag-ttgggttttgaccag-ttggaaca 17634 Query: 805 gggtataatatttttgccttagcggcacccctcgtccaattatccaagatagtctctagc 864 | |||||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 17635 gtgtataataattttggcttagcggcaccctcggtccagttatccaagatagtctctagc 17694 Query: 865 ttgcttggaa-gataccg-gttcatctaatgg-atagggaacacgt 907 |||||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 17695 ttgcttggaatgataccgtgttcatctaatggaatagggaacacgt 17740 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5683 Number of Sequences: 1807 Number of extensions: 5683 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)