BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZG07RM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1295 977 0.0 >3x_Contig1295 Length = 7117 Score = 977 bits (493), Expect = 0.0 Identities = 562/581 (96%), Gaps = 3/581 (0%) Strand = Plus / Plus Query: 64 gatgtatgtttcgaaaatggaattactgtcatgggtatgcaaggaaacatcgacggtgtt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 gatgtatgtttcgaaaatggaattactgtcatgggtatgcaaggaaacatcgacggtgtt 369 Query: 124 tctggtgatattgctttgttggcaccatcattcatcatcaccgaagacgatgtctccacc 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 tctggtgatattgctttgttggcaccatcattcatcatcaccgaagacgatgtctccacc 429 Query: 184 attgtggaaagagttaccaagtctgttgatgatatgaccgttctactaaaggctgaaggc 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 attgtggaaagagttaccaagtctgttgatgatatgaccgttctactaaaggctgaaggc 489 Query: 244 catttctgagaaggcttcagctgtgctaagtattctaacgactatataacggcacatacg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 catttctgagaaggcttcagctgtgctaagtattctaacgactatataacggcacatacg 549 Query: 304 tagacgtattgtgccacctcttctctgtacttgttctttaaaactccatgtctcatcata 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 tagacgtattgtgccacctcttctctgtacttgttctttaaaactccatgtctcatcata 609 Query: 364 acagttatgtgtcaagcaaatcagttccttttttcctaatatttttttgacactttgaac 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 acagttatgtgtcaagcaaatcagttccttttttcctaatatttttttgacactttgaac 669 Query: 424 ctttaagctgtttttattcgcgtaaatgtatattattaacaaagtgatcgaaactaaaat 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 ctttaagctgtttttattcgcgtaaatgtatattattaacaaagtgatcgaaactaaaat 729 Query: 484 atcagcaggaaagtcaaaaattgaaagccgagttaaaggtcctacattaacatcaacgta 543 ||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| Sbjct: 730 atcagcaggaaagtcaaaaatagaaggccgagttaagggtcctacattaacatcaacgta 789 Query: 544 gttagattttccttattaactcacaaattcgggcccaattagtagatttttattttttcc 603 || ||||||| |||| |||||||||||||| |||||| | ||||||| | || | | | | Sbjct: 790 gtaagatttt-cttagtaactcacaaattccggcccagtaagtagatatata-tatgtac 847 Query: 604 gttttttttcgccattgtagagcatttggctgtaagcttat 644 || |||||||| ||||||||||||| | ||||||||||||| Sbjct: 848 gtcttttttcggcattgtagagcatct-gctgtaagcttat 887 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9006 Number of Sequences: 1807 Number of extensions: 9006 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)