BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC36ZG09FM1.SCF screened BAC_end
         (973 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig640                                                         1287   0.0  

>3x_Contig640 
          Length = 3164

 Score = 1287 bits (649), Expect = 0.0
 Identities = 745/773 (96%), Gaps = 3/773 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   ctacattgggttcattagaagctttattagacttcttaaaagacatgaaaattcctgtta 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 ctacattgggttcattagaagctttattagacttcttaaaagacatgaaaattcctgtta 1189

                                                                        
Query: 146  tgtctgtcggattaggtcctgtttacaagcgtgatataatgaaggcttgtactatgttag 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 tgtctgtcggattaggtcctgtttacaagcgtgatataatgaaggcttgtactatgttag 1249

                                                                        
Query: 206  aaaaagctcctgaattagcggttatgctatgctttgatgtcaaggttgataaggaagcag 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 aaaaagctcctgaattagcggttatgctatgctttgatgtcaaggttgataaggaagcag 1309

                                                                        
Query: 266  aacaatatgctgcagaacaacatatcaaaattttcaatgctgatattatttaccatttat 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1310 aacaatatgctgcagaacaacatatcaaaattttcaatgctgatattatttaccatttat 1369

                                                                        
Query: 326  tcgatgccttcacagcctaccagaaggaactacttgaaaagcgtcgtgctgagtttatcg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1370 tcgatgccttcacagcctaccagaaggaactacttgaaaagcgtcgtgctgagtttatcg 1429

                                                                        
Query: 386  gtgacgctaccttcccatgcgtcctgaacactctacaaatcattaacaagcgtggcccta 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1430 gtgacgctaccttcccatgcgtcctgaacactctacaaatcattaacaagcgtggcccta 1489

                                                                        
Query: 446  tgatcattggtgtggatgtcattgaaggttcattgaagatcggtactcctatctgtgcag 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1490 tgatcattggtgtggatgtcattgaaggttcattgaagatcggtactcctatctgtgcag 1549

                                                                        
Query: 506  tgaaatatgacccagcaacaaaggagagaataacattgttgcttggtagagtcacttcct 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1550 tgaaatatgacccagcaacaaaggagagaataacattgttgcttggtagagtcacttcct 1609

                                                                        
Query: 566  ttggaatcaatcaccaatctgtgactgaagtcaagatgggtcaaaccaatgcaagtgttg 625
            | | |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 1610 tggaaatcaatcaccaatctgtgactgaagtcaagaagggtcaaaccaatgcaggtgttg 1669

                                                                        
Query: 626  caatgcgtttagaagatcctttcggtcagcatccaatctggggtcgccatgttgatgaaa 685
            ||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||
Sbjct: 1670 caatgcgtttagaagatccttccggtcagcaaccaatctggggtcgtcatgttgatgaaa 1729

                                                                        
Query: 686  aa-atacattgtattctcacatcactagaaagtccattgattcattggaagattctgctt 744
            || ||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 1730 aagatacattgtattctcacatcactagaaggtccattgatacattgaaagatcctgctt 1789

                                                                        
Query: 745  tccaaagatcaatttccaaaatctgattgaatgttgattccgaaactaaaagcagtcctt 804
            | || ||||||| |||||||||||||||| ||||||||||  ||||||||  |||| |||
Sbjct: 1790 t-cagagatcaagttccaaaatctgattggatgttgattcgtaaactaaagccagt-ctt 1847

                                                                 
Query: 805  tggatccaaatatttaaatagcctttacctgtaaattatgttaaaattgtaaa 857
            ||||  | |||| ||||||||| |||||||||||||||||| ||| |||||||
Sbjct: 1848 tggaatcgaatagttaaatagcatttacctgtaaattatgtaaaagttgtaaa 1900


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8464
Number of Sequences: 1807
Number of extensions: 8464
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)