BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZG09FM1.SCF screened BAC_end (973 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig640 1287 0.0 >3x_Contig640 Length = 3164 Score = 1287 bits (649), Expect = 0.0 Identities = 745/773 (96%), Gaps = 3/773 (0%) Strand = Plus / Plus Query: 86 ctacattgggttcattagaagctttattagacttcttaaaagacatgaaaattcctgtta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1130 ctacattgggttcattagaagctttattagacttcttaaaagacatgaaaattcctgtta 1189 Query: 146 tgtctgtcggattaggtcctgtttacaagcgtgatataatgaaggcttgtactatgttag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1190 tgtctgtcggattaggtcctgtttacaagcgtgatataatgaaggcttgtactatgttag 1249 Query: 206 aaaaagctcctgaattagcggttatgctatgctttgatgtcaaggttgataaggaagcag 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1250 aaaaagctcctgaattagcggttatgctatgctttgatgtcaaggttgataaggaagcag 1309 Query: 266 aacaatatgctgcagaacaacatatcaaaattttcaatgctgatattatttaccatttat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1310 aacaatatgctgcagaacaacatatcaaaattttcaatgctgatattatttaccatttat 1369 Query: 326 tcgatgccttcacagcctaccagaaggaactacttgaaaagcgtcgtgctgagtttatcg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1370 tcgatgccttcacagcctaccagaaggaactacttgaaaagcgtcgtgctgagtttatcg 1429 Query: 386 gtgacgctaccttcccatgcgtcctgaacactctacaaatcattaacaagcgtggcccta 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1430 gtgacgctaccttcccatgcgtcctgaacactctacaaatcattaacaagcgtggcccta 1489 Query: 446 tgatcattggtgtggatgtcattgaaggttcattgaagatcggtactcctatctgtgcag 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1490 tgatcattggtgtggatgtcattgaaggttcattgaagatcggtactcctatctgtgcag 1549 Query: 506 tgaaatatgacccagcaacaaaggagagaataacattgttgcttggtagagtcacttcct 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1550 tgaaatatgacccagcaacaaaggagagaataacattgttgcttggtagagtcacttcct 1609 Query: 566 ttggaatcaatcaccaatctgtgactgaagtcaagatgggtcaaaccaatgcaagtgttg 625 | | |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 1610 tggaaatcaatcaccaatctgtgactgaagtcaagaagggtcaaaccaatgcaggtgttg 1669 Query: 626 caatgcgtttagaagatcctttcggtcagcatccaatctggggtcgccatgttgatgaaa 685 ||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 1670 caatgcgtttagaagatccttccggtcagcaaccaatctggggtcgtcatgttgatgaaa 1729 Query: 686 aa-atacattgtattctcacatcactagaaagtccattgattcattggaagattctgctt 744 || ||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||| Sbjct: 1730 aagatacattgtattctcacatcactagaaggtccattgatacattgaaagatcctgctt 1789 Query: 745 tccaaagatcaatttccaaaatctgattgaatgttgattccgaaactaaaagcagtcctt 804 | || ||||||| |||||||||||||||| |||||||||| |||||||| |||| ||| Sbjct: 1790 t-cagagatcaagttccaaaatctgattggatgttgattcgtaaactaaagccagt-ctt 1847 Query: 805 tggatccaaatatttaaatagcctttacctgtaaattatgttaaaattgtaaa 857 |||| | |||| ||||||||| |||||||||||||||||| ||| ||||||| Sbjct: 1848 tggaatcgaatagttaaatagcatttacctgtaaattatgtaaaagttgtaaa 1900 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8464 Number of Sequences: 1807 Number of extensions: 8464 Number of successful extensions: 79 Number of sequences better than 1.0e-20: 1 length of query: 973 length of database: 10,358,551 effective HSP length: 16 effective length of query: 957 effective length of database: 10,329,639 effective search space: 9885464523 effective search space used: 9885464523 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)