BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZG10RM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig738 862 0.0 >3x_Contig738 Length = 1897 Score = 862 bits (435), Expect = 0.0 Identities = 553/587 (94%), Gaps = 4/587 (0%) Strand = Plus / Plus Query: 46 cttaactatatatctgttagcttttgcaggatgtaactacattttcctttgatttttgaa 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 cttaactatatatctgttagcttttgcaggatgtaactacattttcctttgatttttgaa 1316 Query: 106 tgttaaagttacgttgtaagtttacatatgtatatttagttcaactattcattgcttcct 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 tgttaaagttacgttgtaagtttacatatgtatatttagttcaactattcattgcttcct 1376 Query: 166 taattgtttgtttctccgatggctaatatgcgcaaccacatgtgggaggaagaatgcata 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1377 taattgtttgtttctccgatggctaatatgcgcaaccacatgtgggaggaagaatgcaaa 1436 Query: 226 aaggtgcagatgttcatagaatgtatatacatcttaattcttaatgatttcttgtcttgg 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1437 aaggtgcagatgttcatagaatgtatatacatcttaattcttaatgatttcttgtcttgg 1496 Query: 286 aattattatacaattgctcgcgttcttgaataccagagtgtatgtgtaagatcttacaaa 345 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1497 aattattatacaattgctcgcgttcttgaataccagagtgtatgtgtaagagcttacaaa 1556 Query: 346 tacggtacattgtcacatttattattcgttcgtctggtgaaactgttgtaccttgggttt 405 ||||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 1557 tacggtacattgtcagatttattattcgtttgtctggtaaaactgttgtagcttgggttt 1616 Query: 406 tcgttcatatatgggttgctaccacagaaaccttgatattgtgtgttagcagagaaagag 465 ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 1617 tcgttcaaatatgggttgctaccagagaaaccttgatattgtgtgttagcagagaaggag 1676 Query: 466 tcttccggtttccttatatttgcagtgcctggaactgttggaacacggatatatctcg-g 524 | |||||||||||||| ||||| ||||| |||| |||||||||||||| |||| |||| | Sbjct: 1677 ttttccggtttccttaaatttgtagtgcttggagctgttggaacacggttataactcgtg 1736 Query: 525 gtgatgtcccccatgacagcagaacttggctg-aattgttcgtttgcgcttccagagttc 583 || ||||||||||||| |||||||||||||| ||| |||||||| |||| ||||| Sbjct: 1737 gtattgtcccccatgacggcagaacttggctgcaatggttcgtttccgctcgaagagtca 1796 Query: 584 aatcttct-atacgagatgaag-atcgcattttgtattaaagtcgtc 628 |||||||| ||||||||||||| |||| || | |||||| ||||||| Sbjct: 1797 aatcttctaatacgagatgaagtatcgtatgtggtattagagtcgtc 1843 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7406 Number of Sequences: 1807 Number of extensions: 7406 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)