BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC36ZG10RM1.SCF screened BAC_end
         (905 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig738                                                          862   0.0  

>3x_Contig738 
          Length = 1897

 Score =  862 bits (435), Expect = 0.0
 Identities = 553/587 (94%), Gaps = 4/587 (0%)
 Strand = Plus / Plus

                                                                        
Query: 46   cttaactatatatctgttagcttttgcaggatgtaactacattttcctttgatttttgaa 105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 cttaactatatatctgttagcttttgcaggatgtaactacattttcctttgatttttgaa 1316

                                                                        
Query: 106  tgttaaagttacgttgtaagtttacatatgtatatttagttcaactattcattgcttcct 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 tgttaaagttacgttgtaagtttacatatgtatatttagttcaactattcattgcttcct 1376

                                                                        
Query: 166  taattgtttgtttctccgatggctaatatgcgcaaccacatgtgggaggaagaatgcata 225
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1377 taattgtttgtttctccgatggctaatatgcgcaaccacatgtgggaggaagaatgcaaa 1436

                                                                        
Query: 226  aaggtgcagatgttcatagaatgtatatacatcttaattcttaatgatttcttgtcttgg 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1437 aaggtgcagatgttcatagaatgtatatacatcttaattcttaatgatttcttgtcttgg 1496

                                                                        
Query: 286  aattattatacaattgctcgcgttcttgaataccagagtgtatgtgtaagatcttacaaa 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1497 aattattatacaattgctcgcgttcttgaataccagagtgtatgtgtaagagcttacaaa 1556

                                                                        
Query: 346  tacggtacattgtcacatttattattcgttcgtctggtgaaactgttgtaccttgggttt 405
            ||||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||||||
Sbjct: 1557 tacggtacattgtcagatttattattcgtttgtctggtaaaactgttgtagcttgggttt 1616

                                                                        
Query: 406  tcgttcatatatgggttgctaccacagaaaccttgatattgtgtgttagcagagaaagag 465
            ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 1617 tcgttcaaatatgggttgctaccagagaaaccttgatattgtgtgttagcagagaaggag 1676

                                                                        
Query: 466  tcttccggtttccttatatttgcagtgcctggaactgttggaacacggatatatctcg-g 524
            | |||||||||||||| ||||| ||||| |||| |||||||||||||| |||| |||| |
Sbjct: 1677 ttttccggtttccttaaatttgtagtgcttggagctgttggaacacggttataactcgtg 1736

                                                                        
Query: 525  gtgatgtcccccatgacagcagaacttggctg-aattgttcgtttgcgcttccagagttc 583
            ||  ||||||||||||| |||||||||||||| ||| |||||||| ||||   |||||  
Sbjct: 1737 gtattgtcccccatgacggcagaacttggctgcaatggttcgtttccgctcgaagagtca 1796

                                                           
Query: 584  aatcttct-atacgagatgaag-atcgcattttgtattaaagtcgtc 628
            |||||||| ||||||||||||| |||| || | |||||| |||||||
Sbjct: 1797 aatcttctaatacgagatgaagtatcgtatgtggtattagagtcgtc 1843


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7406
Number of Sequences: 1807
Number of extensions: 7406
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)