BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZH02FM1.SCF screened BAC_end (900 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig295 1390 0.0 >3x_Contig295 Length = 1297 Score = 1390 bits (701), Expect = 0.0 Identities = 739/745 (99%), Gaps = 5/745 (0%) Strand = Plus / Plus Query: 87 cgaggtcttgctcaccggaatcacctaccagaatgaactttttgttcgggaaatcattgc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 cgaggtcttgctcaccggaatcacctaccagaatgaactttttgttcgggaaatcattgc 616 Query: 147 atattttcaatattgatgcaagctttctctgtgcactggatttcataatacttgagagta 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 atattttcaatattgatgcaagctttctctgtgcactggatttcataatacttgagagta 676 Query: 207 agttaccagaatactgtttgaggaacatgggtcctaacggatagttttcaccaatatatt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 agttaccagaatactgtttgaggaacatgggtcctaacggatagttttcaccaatatatt 736 Query: 267 ccgataatattgggtatatctgagcaggggcatttgatacataaaagaaatcaactgctt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ccgataatattgggtatatctgagcaggggcatttgatacataaaagaaatcaactgctt 796 Query: 327 tgctatcttttaatgtcgtataccataatggcatatcttgaattttccattgttcaaatc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 tgctatcttttaatgtcgtataccataatggcatatcttgaattttccattgttcaaatc 856 Query: 387 cgttgacaaaaacgttcaaaaagatcgatcttttatctccaacaatacctgtgtgtttta 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 cgttgacaaaaacgttcaaaaagatcgatcttttatctccaacaatacctgtgtgtttta 916 Query: 447 ttgtatcatctatgtcactaataagtccaactccactgttttcgacataaaaaatctggc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 ttgtatcatctatgtcactaataagtccaactccactgttttcgacataaaaaatctggc 976 Query: 507 aatcttggactagcccggtttccaagcatttaacttttgcaccagctggtttaaattcgg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 aatcttggactagcccggtttccaagcatttaacttttgcaccagctggtttaaattcgg 1036 Query: 567 tactgagtaaaatattaaacccaccagagttatcagagaccgttatttgatccatcttat 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1037 tactgagtaaaatattaaacccaccagagttatcagagaccgttatttgatccatcttat 1096 Query: 627 catttgatccgttatacagcgtagttagaaggttgacgttcgggagatgtttattcatga 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1097 catttgatccgttatacagcgtagttagaaggttgacgttcgggagatgtttattcatga 1156 Query: 687 accccgctattctttgccttaaaac-tgttcctgtgtcaagggagcaaccccatctccca 745 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1157 accccgctattctttgccttaaaacttgttcctgtgtcaagggagcaaccccatctccca 1216 Query: 746 ttgacagtttgacctgagcttgttggatgatgaccgtcgtatatgaactgtccaacgaga 805 ||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||| Sbjct: 1217 ttgacag-ttgacctgagcttg-tggatgatga-cgtcgtagatgaactgtccaacgaga 1273 Query: 806 tattagaattcgttttgcaaagatt 830 |||||||| |||||||||||||||| Sbjct: 1274 tattagaa-tcgttttgcaaagatt 1297 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6426 Number of Sequences: 1807 Number of extensions: 6426 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 900 length of database: 10,358,551 effective HSP length: 16 effective length of query: 884 effective length of database: 10,329,639 effective search space: 9131400876 effective search space used: 9131400876 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)