BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC36ZH02FM1.SCF screened BAC_end
         (900 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig295                                                         1390   0.0  

>3x_Contig295 
          Length = 1297

 Score = 1390 bits (701), Expect = 0.0
 Identities = 739/745 (99%), Gaps = 5/745 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   cgaggtcttgctcaccggaatcacctaccagaatgaactttttgttcgggaaatcattgc 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557  cgaggtcttgctcaccggaatcacctaccagaatgaactttttgttcgggaaatcattgc 616

                                                                        
Query: 147  atattttcaatattgatgcaagctttctctgtgcactggatttcataatacttgagagta 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617  atattttcaatattgatgcaagctttctctgtgcactggatttcataatacttgagagta 676

                                                                        
Query: 207  agttaccagaatactgtttgaggaacatgggtcctaacggatagttttcaccaatatatt 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677  agttaccagaatactgtttgaggaacatgggtcctaacggatagttttcaccaatatatt 736

                                                                        
Query: 267  ccgataatattgggtatatctgagcaggggcatttgatacataaaagaaatcaactgctt 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737  ccgataatattgggtatatctgagcaggggcatttgatacataaaagaaatcaactgctt 796

                                                                        
Query: 327  tgctatcttttaatgtcgtataccataatggcatatcttgaattttccattgttcaaatc 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797  tgctatcttttaatgtcgtataccataatggcatatcttgaattttccattgttcaaatc 856

                                                                        
Query: 387  cgttgacaaaaacgttcaaaaagatcgatcttttatctccaacaatacctgtgtgtttta 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857  cgttgacaaaaacgttcaaaaagatcgatcttttatctccaacaatacctgtgtgtttta 916

                                                                        
Query: 447  ttgtatcatctatgtcactaataagtccaactccactgttttcgacataaaaaatctggc 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917  ttgtatcatctatgtcactaataagtccaactccactgttttcgacataaaaaatctggc 976

                                                                        
Query: 507  aatcttggactagcccggtttccaagcatttaacttttgcaccagctggtttaaattcgg 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977  aatcttggactagcccggtttccaagcatttaacttttgcaccagctggtttaaattcgg 1036

                                                                        
Query: 567  tactgagtaaaatattaaacccaccagagttatcagagaccgttatttgatccatcttat 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 tactgagtaaaatattaaacccaccagagttatcagagaccgttatttgatccatcttat 1096

                                                                        
Query: 627  catttgatccgttatacagcgtagttagaaggttgacgttcgggagatgtttattcatga 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 catttgatccgttatacagcgtagttagaaggttgacgttcgggagatgtttattcatga 1156

                                                                        
Query: 687  accccgctattctttgccttaaaac-tgttcctgtgtcaagggagcaaccccatctccca 745
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1157 accccgctattctttgccttaaaacttgttcctgtgtcaagggagcaaccccatctccca 1216

                                                                        
Query: 746  ttgacagtttgacctgagcttgttggatgatgaccgtcgtatatgaactgtccaacgaga 805
            ||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||
Sbjct: 1217 ttgacag-ttgacctgagcttg-tggatgatga-cgtcgtagatgaactgtccaacgaga 1273

                                     
Query: 806  tattagaattcgttttgcaaagatt 830
            |||||||| ||||||||||||||||
Sbjct: 1274 tattagaa-tcgttttgcaaagatt 1297


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6426
Number of Sequences: 1807
Number of extensions: 6426
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)