BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZH02RM1.SCF screened BAC_end (874 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1780 1031 0.0 >3x_Contig1780 Length = 27883 Score = 1031 bits (520), Expect = 0.0 Identities = 578/592 (97%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 47 atactgcgcatattgtgtttcaatagcaccgtcggctcgtagcttatcccatgtaggtgc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19537 atactgcgcatattgtgtttcaatagcaccgtcggctcgtagcttatcccatgtaggtgc 19596 Query: 107 attttcgttacgtttgtaattaatgatcccagtatcatataagttggctacgtctccaac 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19597 attttcgttacgtttgtaattaatgatcccagtatcatataagttggctacgtctccaac 19656 Query: 167 ggtgtacatcttattgacatctgacggagcaaacaaggtaaaccttttactgtcacttac 226 ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 19657 ggtgtacatcttagtgacatctgacggagcaaacaaggtaaaccttttacggccacttac 19716 Query: 227 aggaatatatatgttatcggcatgatcatgatgaagtccagatgatgatccacctcctgg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19717 aggaatatatatgttatcggcatgatcatgatgaagtccagatgatgatccacctcctgg 19776 Query: 287 aatatttcgtccaagacctaatttttcatcgttcgggtcgaaattgccaagaaaactttg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19777 aatatttcgtccaagacctaatttttcatcgttcgggtcgaaattgccaagaaaactttg 19836 Query: 347 atcactatccttttcactggcagatccgacccatatgtttatttgttggggcactaactt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19837 atcactatccttttcactggcagatccgacccatatgtttatttgttggggcactaactt 19896 Query: 407 caagaagtgtaattgctctggaatttcgtttactaacttatcaagcggaggttgatatag 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19897 caagaagtgtaattgctctggaatttcgtttactaacttatcaagcggaggttgatatag 19956 Query: 467 ttcccttacagcagctaaatcgtcggcactttcctcttcattt-catcatcactgtcatc 525 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 19957 ttcccttacagcagctaaatcgtcggcacttccctcttcatttccatcatcactgtcatc 20016 Query: 526 attttcttgcatttcctcaaaatattcgcgaa-gtcattgaaatttattg-atccacaga 583 ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 20017 attttcttgcatttcctcaaaatcatcgcgaaggtcattgaaatttattgaatccacaga 20076 Query: 584 gcccactttccaaacgtcatttggaaacatatttctccc-cattcaacggag 634 |||||||| | ||||||||| |||||||||||||||||| |||||| ||||| Sbjct: 20077 gcccacttccgaaacgtcatctggaaacatatttctcccacattcagcggag 20128 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7938 Number of Sequences: 1807 Number of extensions: 7938 Number of successful extensions: 79 Number of sequences better than 1.0e-20: 1 length of query: 874 length of database: 10,358,551 effective HSP length: 16 effective length of query: 858 effective length of database: 10,329,639 effective search space: 8862830262 effective search space used: 8862830262 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)