BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZH05RM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1494 1120 0.0 >3x_Contig1494 Length = 10561 Score = 1120 bits (565), Expect = 0.0 Identities = 595/605 (98%) Strand = Plus / Minus Query: 40 actagtatcgacaatatccatcttctacaaagtaattcgagtctttaatatctaacactc 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8852 actagtatcgacaatatccatcttctacaaagtaattcgagtctttaatatctaacactc 8793 Query: 100 aggctctggaatctagtaatcttgatccaaatttaattttttcactgccaccaaagcaac 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8792 aggctctggaatctagtaatcttgatccaaatttaattttttcactgccaccaaagcaac 8733 Query: 160 tgtatgaaatgcacagtttcaataaagaatcaacaaaatacaagttgaaccgtaaactta 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8732 tgtatgaaatgcacagtttcaataaagaatcaacaaaatacaagttgaaccgtaaactta 8673 Query: 220 gtagacttagagttctacaagcatcccaaaatattaaatacagtagacatctgaaaaaaa 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8672 gtagacttagagttctacaagcatcccaaaatattaaatacagtagacatctgaaaaaaa 8613 Query: 280 aacagaacacacgaagaatcaaactataaaacctacaagtaccgtatatatctaaaaccc 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8612 aacagaacacacgaagaatcaaactataaaacctacaagtaccgtatatatctaaaaccc 8553 Query: 340 ttctgtctttgaaatactcaaaatgtgtttccatttgtaatacaagtttaaatttcaaat 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8552 ttctgtctttgaaatactcaaaatgtgtttccatttgtaatacaagtttaaatttcaaat 8493 Query: 400 cccaaaatttcatgcatacatttttttttctatatgacaaacggaaaatctgaataataa 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8492 cccaaaatttcatgcatacatttttttttctatatgacaaacggaaaatctgaataataa 8433 Query: 460 tgtgatatatacgcatctatatgttgccatgagcctctaggtgttaatatcttgtaatcg 519 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 8432 tgtgatatatacgcatctatatgttgccatgagcctcttggtgttaatatcttgtaatcg 8373 Query: 520 ccgtcatgaacagatagttatctgggattcactagaattgatactatggtggatccttag 579 ||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 8372 ccgtcatgaacggatagttatctgggattcactagaattgatactatgttgtatccttag 8313 Query: 580 tttctactactctcggtaatttcccagtttatgctataaatttgacatttggcaaattta 639 ||||||||||||||| ||||| || |||||||||||||||||||||||||| || || || Sbjct: 8312 tttctactactctcgttaattcccaagtttatgctataaatttgacatttgtcagatcta 8253 Query: 640 cgaat 644 ||||| Sbjct: 8252 cgaat 8248 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,454 Number of Sequences: 1807 Number of extensions: 15454 Number of successful extensions: 95 Number of sequences better than 1.0e-20: 1 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)