BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZH08RM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1426 1039 0.0 >3x_Contig1426 Length = 8319 Score = 1039 bits (524), Expect = 0.0 Identities = 551/559 (98%), Gaps = 1/559 (0%) Strand = Plus / Minus Query: 48 cttccgctgtaccgaatttttgaacaatgtatttttcc-caggaatgaagtagctgttaa 106 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 579 cttccgctgtaccgaatttttgaacaatgtatttttccacaggaatgaagtagctgttaa 520 Query: 107 gctctttagcgggggtctcatctcctgtctgatctttcttatacgattcgagacattgac 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 gctctttagcgggggtctcatctcctgtctgatctttcttatacgattcgagacattgac 460 Query: 167 caactatattggataactgttcaaggtccggcagtatcttgccctcagtatccctagaat 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 caactatattggataactgttcaaggtccggcagtatcttgccctcagtatccctagaat 400 Query: 227 ttgctgtttgtctcaaaacaacagtcacctcacatattgtacatttgaacttaactgcgt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 ttgctgtttgtctcaaaacaacagtcacctcacatattgtacatttgaacttaactgcgt 340 Query: 287 ctataggatgtcgtaacaaggttccgcaacatctacatcgagtttccctaaattttggcg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 ctataggatgtcgtaacaaggttccgcaacatctacatcgagtttccctaaattttggcg 280 Query: 347 ggtcttcacaatccaacctatccgaactttgatagcggatttttatcttttccctaccaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 ggtcttcacaatccaacctatccgaactttgatagcggatttttatcttttccctaccaa 220 Query: 407 caatgtgtaatgggttaaacttgaacatattcgagcagctactgatggacagtcagactt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 caatgtgtaatgggttaaacttgaacatattcgagcagctactgatggacagtcagactt 160 Query: 467 cttcctctaagttcatttcaacaaacttgtaaatttatggttggatagtcgaaagcacaa 526 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 159 cttcctctaagttcatttcaacaaacttgtaaatttagggttggatagtcgaaagcacaa 100 Query: 527 aagattgtgtcaaatttattacttttttttaccaactngacatatcatcttggatacaca 586 ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| Sbjct: 99 aagattgtgtcaaatttattacttttttttaccaactgacaatatcatctggaatacaca 40 Query: 587 ggcctgtaaccatttctta 605 ||||||||||||||||||| Sbjct: 39 ggcctgtaaccatttctta 21 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,130 Number of Sequences: 1807 Number of extensions: 15130 Number of successful extensions: 174 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)