BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZA02RM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1702 1255 0.0 >3x_Contig1702 Length = 15454 Score = 1255 bits (633), Expect = 0.0 Identities = 681/692 (98%), Gaps = 4/692 (0%) Strand = Plus / Minus Query: 48 cgatgcatcgtagaatactgtctcgccactttttgattttccggaagagatgtgggagat 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2432 cgatgcatcgtagaatactgtctcgccactttttgattttccggaagagatgtgggagat 2373 Query: 108 cttcgaccactgaccggctatcgtatacaaagcgttatgcttgtcattggagtcgttaaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2372 cttcgaccactgaccggctatcgtatacaaagcgttatgcttgtcattggagtcgttaaa 2313 Query: 168 acttttaaagattcttgccttaaaagaattcttcttaccgctgaaataacccttacctga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2312 acttttaaagattcttgccttaaaagaattcttcttaccgctgaaataacccttacctga 2253 Query: 228 aaactcaatagaacagtaaagaccattggaagcttgaatgtatgatttaccttccaattc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2252 aaactcaatagaacagtaaagaccattggaagcttgaatgtatgatttaccttccaattc 2193 Query: 288 tacgaatggggaagcagctaaaagaccttcgatatgcaaaggaggtaatgtaatcaagta 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2192 tacgaatggggaagcagctaaaagaccttcgatatgcaaaggaggtaatgtaatcaagta 2133 Query: 348 ctgttcgtttaatttaccaaagtttaagatggcgtgtccgtattgcttcacattcaatga 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2132 ctgttcgtttaatttaccaaagtttaagatggcgtgtccgtattgcttcacattcaatga 2073 Query: 408 catcttggagatcgatgctttaacttggttgtaaccttccaaactcacctgattcttatc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2072 catcttggagatcgatgctttaacttggttgtaaccttccaaactcacctgattcttatc 2013 Query: 468 attgaagattgtataagcagtgataggaggatgatgagaaacttgttcagataataagac 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2012 attgaagattgtataagcagtgataggaggatgatgagaaacttgttcagataataagac 1953 Query: 528 ggttttaccaaattcaggattcgatttgttgttccatttcccaacgaacacctctcctaa 587 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1952 ggtttcaccaaattcaggattcgatttgttgttccatttcccaacgaacacctctcctaa 1893 Query: 588 gaatgggtttaaaggtttcttctcagatcccatggactcattacgagaacaatactggga 647 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1892 gaatgggtttaaaggtttcttctcagatcccatggactcattacgagaacaatactgtga 1833 Query: 648 tttcaaagttggaataaaaccattt-acaacggncaac-tacgcaac-attctgggggcg 704 ||||||||||| ||| ||||||||| ||||||| |||| |||||||| |||||||||||| Sbjct: 1832 tttcaaagttgaaat-aaaccatttaacaacggccaacatacgcaacaattctgggggcg 1774 Query: 705 taccattactttaaggttcagtgatgaaagaa 736 |||||| ||| | ||||||||||||||||||| Sbjct: 1773 taccatcactatcaggttcagtgatgaaagaa 1742 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7421 Number of Sequences: 1807 Number of extensions: 7421 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)