BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZA03RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig806 1146 0.0 >3x_Contig806 Length = 2480 Score = 1146 bits (578), Expect = 0.0 Identities = 642/659 (97%), Gaps = 4/659 (0%) Strand = Plus / Plus Query: 61 ggcctaaataaaaatgccatcgaaatgatgtctattgttagtaaaaattgttcatattaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1607 ggcctaaataaaaatgccatcgaaatgatgtctattgttagtaaaaattgttcatattaa 1666 Query: 121 aaccaataccacactactcatatagttgtcctgtttcagaactgcagtccaattatttcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1667 aaccaataccacactactcatatagttgtcctgtttcagaactgcagtccaattatttcg 1726 Query: 181 gacatctccttaggagatgtagaagagcataaatatgcaggatagaatattcaacgaaag 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1727 gacatctccttaggagatgtagaagagcataaatatgcaggatagaatattcaacgaaag 1786 Query: 241 gtgttccgcagaagcttttaattcaggtttccaaattcaaaaggaaattatggtatctta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1787 gtgttccgcagaagcttttaattcaggtttccaaattcaaaaggaaattatggtatctta 1846 Query: 301 agcctgttatcatagttgttcttgtctttctcctctacactctagatgtcaaacgtttcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1847 agcctgttatcatagttgttcttgtctttctcctctacactctagatgtcaaacgtttcc 1906 Query: 361 tatacgtccatcgaaaaataactgtcgttagaccatctatcttgccacaaatttggttat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1907 tatacgtccatcgaaaaataactgtcgttagaccatctatcttgccacaaatttggttat 1966 Query: 421 tgacttgtgcattacaataccgataatgttgaagagtttcctcgccgaacggtttgctca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1967 tgacttgtgcattacaataccgataatgttgaagagtttcctcgccgaacggtttgctca 2026 Query: 481 aatattgtttgtaggctatctatccatgcattctcaaaagtcatccattttcttcgttat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2027 aatattgtttgtaggctatctatccatgcattctcaaaagtcatccattttcttcgttat 2086 Query: 541 atgctctatttcttgcagttcgntcacacgcttcatacgactcacttg-acataccatct 599 |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||| Sbjct: 2087 atgctctatttcttgcagttcgttcacacgctccatacgactcacttgcacataccatct 2146 Query: 600 cggatgttgtcttactgaggnttnctcttat-caagctaat-agagacaggtaatatcct 657 || |||||||||||||| || || ||||||| ||||||||| |||||||||||||||| Sbjct: 2147 cgaatgttgtcttactgtggtttcctcttatccaagctaataagagacaggtaatatcta 2206 Query: 658 atttgatagctctataacactagatagctttggaa-tgggttcctcaaatcctattgaa 715 || ||||||||||||||||||||||||||||| || ||| | | ||||||||||||||| Sbjct: 2207 atatgatagctctataacactagatagctttgaaattggatacatcaaatcctattgaa 2265 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8320 Number of Sequences: 1807 Number of extensions: 8320 Number of successful extensions: 81 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)