BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC37ZA07FM1.SCF screened BAC_end
         (936 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1502                                                        1427   0.0  

>3x_Contig1502 
          Length = 14970

 Score = 1427 bits (720), Expect = 0.0
 Identities = 825/851 (96%), Gaps = 8/851 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   ttcaataaaaggcataaatcttccttagttggatgtattgatatattttgacataaagag 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8280 ttcaataaaaggcataaatcttccttagttggatgtattgatatattttgacataaagag 8221

                                                                        
Query: 146  atgaaatactcctttgccaattttgccttggatgggagagccaaaagagataagagaact 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8220 atgaaatactcctttgccaattttgccttggatgggagagccaaaagagataagagaact 8161

                                                                        
Query: 206  gatactatgctttgacgagggatagatgtatcttggaatgcttcgccatgagtagatatg 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8160 gatactatgctttgacgagggatagatgtatcttggaatgcttcgccatgagtagatatg 8101

                                                                        
Query: 266  atatccaaagccaaaagtagctgttcttcctcaggatcttcttccacaaactcgctacga 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8100 atatccaaagccaaaagtagctgttcttcctcaggatcttcttccacaaactcgctacga 8041

                                                                        
Query: 326  tttgtaggtttattagcattcttgattgcaacttttttacc-gatttccattacttttac 384
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 8040 tttgtaggtttattagcattcttgattgcaacttttttacccgatttccattacttttac 7981

                                                                        
Query: 385  gagtagtggaaggatataagtcaatgccatagattggaaaggtatttgtctgcaaccatg 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7980 gagtagtggaaggatataagtcaatgccatagattggaaaggtatttgtctgcaaccatg 7921

                                                                        
Query: 445  tttgattttgaataatgcagttgaaatcagttccaatttagtctctgaattcagatctga 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7920 tttgattttgaataatgcagttgaaatcagttccaatttagtctctgaattcagatctga 7861

                                                                        
Query: 505  aagaagatgaggaactctatgaactatcatcgttgcgtaaccaacagttttagcgaacat 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7860 aagaagatgaggaactctatgaactatcatcgttgcgtaaccaacagttttagcgaacat 7801

                                                                        
Query: 565  tcctaacctatcatccaacaaaaaggataattgcaaaaatacgtcaaatccgagtgatcc 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7800 tcctaacctatcatccaacaaaaaggataattgcaaaaatacgtcaaatccgagtgatcc 7741

                                                                        
Query: 625  aaatagcanataaaagtttttctgttgtagaatatctaacaacgaattcacagatgtggg 684
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7740 aaatagcaaataaaagtttttctgttgtagaatatctaacaacgaattcacagatgtggg 7681

                                                                        
Query: 685  gaaccaatatttgataccattatccaaaagatttgctttagaagccaactgagaaatgat 744
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7680 gaaccaatatttgataccattatccaaaagatttgcttcagaagccaactgagaaatgat 7621

                                                                        
Query: 745  atcnataacgcatttcacagataaaacgagctcattaatacttgatctaacatttgattc 804
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 7620 atcaataacgcatttcacagataaaacgagctcattaatacttgatctaacatttgatt- 7562

                                                                        
Query: 805  ccttnttcaactggtcgtcgacaatctggtggttcttccttnttcaaatttctttgaaac 864
            |||| |||||||| ||||||||||||| || |||||||||| ||| || ||||||||| |
Sbjct: 7561 cctttttcaactgttcgtcgacaatct-gttgttcttccttgttc-aacttctttgaacc 7504

                                                                        
Query: 865  tcttcttgggcttggccccttttttaaacttntctgccattttagaaaatccataatcct 924
            | ||||| |||||||  ||||| ||| ||||   ||||||||||| || | |||||||||
Sbjct: 7503 t-ttctt-ggcttgg-tcctttcttatactttcttgccattttag-aatttcataatcct 7448

                       
Query: 925  tggaattcttg 935
            | |||||||||
Sbjct: 7447 ttgaattcttg 7437


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7045
Number of Sequences: 1807
Number of extensions: 7045
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)