BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZA10RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig639 1562 0.0 >3x_Contig639 Length = 2382 Score = 1562 bits (788), Expect = 0.0 Identities = 817/826 (98%), Gaps = 1/826 (0%) Strand = Plus / Plus Query: 45 ctttgttcgctagagcagtttgggcacgggctaatctgaacattgcgtgtgttgtatgtt 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 ctttgttcgctagagcagtttgggcacgggctaatctgaacattgcgtgtgttgtatgtt 181 Query: 105 gtgttgttggtgggggagaaaagcgaaagagaggaagaaaaaccaattgatcccagagac 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gtgttgttggtgggggagaaaagcgaaagagaggaagaaaaaccaattgatcccagagac 241 Query: 165 aatgataaaaaattgtcaattgaaaaacgactcctttttataatttaacaggtcatatta 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 242 aatgataaaaaattgtcaattgaaaaacgactcctttttataatttaacaggtcatatca 301 Query: 225 cagcgcagtccagtgctaagaatttccctcaccaagttaaaccagaaagacggactagtt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 cagcgcagtccagtgctaagaatttccctcaccaagttaaaccagaaagacggactagtt 361 Query: 285 cgagaaggccaacaagggcaatggcaacatcattggaaaaagtgataaattgtgataagt 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 cgagaaggccaacaagggcaatggcaacatcattggaaaaagtgataaattgtgataagt 421 Query: 345 agtgatgcttgatccattagaagagagaaaaaaaaaaaaaatgtgctgcggctgctacag 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 agtgatgcttgatccattagaagagagaaaaaaaaaaaaaatgtgctgcggctgctacag 481 Query: 405 tggagaggcctgaccatgccgagatttgggaaacttaagagacctgggatactggttcgt 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 tggagaggcctgaccatgccgagatttgggaaacttaagagacctgggatactggttcgt 541 Query: 465 ttagtggaaggcacagcacacacctctcactccggttctcgctggacctggacttggact 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 ttagtggaaggcacagcacacacctctcactccggttctcgctggacctggacttggact 601 Query: 525 tggacctggacctgnggcagaggcagaggcagagctccagccctgctggagctctcccaa 584 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 tggacctggacctggggcagaggcagaggcagagctccagccctgctggagctctcccaa 661 Query: 585 ttgctccacaccctgtgtcctgtaaactccgacttctggggaaaaggattttaacacaaa 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ttgctccacaccctgtgtcctgtaaactccgacttctggggaaaaggattttaacacaaa 721 Query: 645 gaatgcgaatgcacactgcanattgacccatagtatctcatattgatgccagttgacatc 704 |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| Sbjct: 722 gaatgcgaatgcacactgcaaattgacccaaagtatctcaaattgatgccagttgacatc 781 Query: 705 aattaacggaggtcgctttttgagtgccttttctcacaatagtgtttgtctcgcaataaa 764 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 782 aattaacggaggtcgctttttgagtgccttttctcacaatagtg-ttgtctcgcaataaa 840 Query: 765 acggagttggctactgcttcttgcgaaactcggagatcctactgattattcatatcattg 824 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 acggagttgcttactgcttcttgcgaaactcggagatcctactgattattcatatcattg 900 Query: 825 agcgggaaaatttcaggcgccgttcgtttaccccttacttgcccct 870 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 901 agcgggaaaatttcaggcgccgttcgtttacccctcacttgcccct 946 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,849 Number of Sequences: 1807 Number of extensions: 13849 Number of successful extensions: 364 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)