BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZB03RM1.SCF screened BAC_end (965 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1448 898 0.0 >3x_Contig1448 Length = 10333 Score = 898 bits (453), Expect = 0.0 Identities = 543/563 (96%), Gaps = 8/563 (1%) Strand = Plus / Minus Query: 47 tcttttctaatgggaagacagtctcgcaaacgggtgtcaaatgggccactgctgttatcg 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9210 tcttttctaatgggaagacagtctcgcaaacgggtgtcaaatgggccactgctgttatcg 9151 Query: 107 ctggtatcgggttgttgacttctgcattgctatccgccttcggtaactctaacgctgctt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9150 ctggtatcgggttgttgacttctgcattgctatccgccttcggtaactctaacgctgctt 9091 Query: 167 cacatgtggctgccaatactatgtcgcttttcttgtatttccaatcggtgactgtgttcg 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9090 cacatgtggctgccaatactatgtcgcttttcttgtatttccaatcggtgactgtgttcg 9031 Query: 227 ccatggaacatgttaacactgtgcctcctatcgccgctgcttggtccgaaaacttgatgt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9030 ccatggaacatgttaacactgtgcctcctatcgccgctgcttggtccgaaaacttgatgt 8971 Query: 287 ggtccatgggattgatccgtgtcactttcatgcaaaaaattttcagatggtatgttcaag 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8970 ggtccatgggattgatccgtgtcactttcatgcaaaaaattttcagatggtatgttcaag 8911 Query: 347 ccactggtggcactccgactctatacttaacctcaaagacaatttctgtttttggttcaa 406 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 8910 ccactggtggcactccgactctatacttaacctcaaagacaatttctg-ttttggttcaa 8852 Query: 407 agatccctagaatatctggnaaagtacccgcatctattagcgtgcngcaaaaagtcttgt 466 ||||||||||||||||||| ||||||||||||||||| ||||||| || | ||||||||| Sbjct: 8851 agatccctagaatatctgg-aaagtacccgcatctataagcgtgcggc-agaagtcttgt 8794 Query: 467 atgggtatttccaacgttcttaatcttcagaggtattaaacgtttaggttaca-tgccca 525 || |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 8793 at-ggtaattccaacgttc-taatcttcagaggtattaaacgtttaggttacagtgccaa 8736 Query: 526 actcgaaattactnctattgttgctactgggtttaacattctttattttatgtgggtatt 585 ||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||| Sbjct: 8735 catcgaaattacttctatcgttgctactggg-ttaacattctttatattatgtgggtatt 8677 Query: 586 tccctattggggttgatcctttg 608 | |||||| ||||||||| |||| Sbjct: 8676 t-cctatttgggttgatcatttg 8655 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 22,754 Number of Sequences: 1807 Number of extensions: 22754 Number of successful extensions: 327 Number of sequences better than 1.0e-20: 1 length of query: 965 length of database: 10,358,551 effective HSP length: 16 effective length of query: 949 effective length of database: 10,329,639 effective search space: 9802827411 effective search space used: 9802827411 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)