BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZB06FM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1295 1067 0.0 >3x_Contig1295 Length = 7117 Score = 1067 bits (538), Expect = 0.0 Identities = 628/656 (95%), Gaps = 2/656 (0%) Strand = Plus / Plus Query: 89 cgttggtcaccgtttccaagatgtatgtttcgaaaatggaattactgtcatgggtatgca 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 cgttggtcaccgtttccaagatgtatgtttcgaaaatggaattactgtcatgggtatgca 350 Query: 149 aggaaacatcgacggtgtttctggtgatattgactttgttggcaccatcattcatcatca 208 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 351 aggaaacatcgacggtgtttctggtgatattg-ctttgttggcaccatcattcatcatca 409 Query: 209 ccgaagacgatgttttcaccattgtggaaagagttaccaagtctgttgatgatatgaccg 268 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 ccgaagacgatgtctccaccattgtggaaagagttaccaagtctgttgatgatatgaccg 469 Query: 269 ttctactaaaagctgaaggccatttctgagaaggcttcagctgtgctaagtattctaacg 328 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 ttctactaaaggctgaaggccatttctgagaaggcttcagctgtgctaagtattctaacg 529 Query: 329 actatataacggcacatacgtatacgtattgtgccacctcttctctgtacttgttcttta 388 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 530 actatataacggcacatacgtagacgtattgtgccacctcttctctgtacttgttcttta 589 Query: 389 aaactccatgtctcatcataacagttatgtgtcaagcaaatcagttccttttttcctaat 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 aaactccatgtctcatcataacagttatgtgtcaagcaaatcagttccttttttcctaat 649 Query: 449 atttttttgacactttgaacctttaatctgtttttattcgcgtcaatgtatattattaac 508 |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 650 atttttttgacactttgaacctttaagctgtttttattcgcgtaaatgtatattattaac 709 Query: 509 aaagtgatcgaaactaatatatcatcacgatagtcaaaaatagaatgccgagttaagggt 568 ||||||||||||||||| |||||| || || |||||||||||||| |||||||||||||| Sbjct: 710 aaagtgatcgaaactaaaatatcagcaggaaagtcaaaaatagaaggccgagttaagggt 769 Query: 569 cctacattaacatcaacgtagtaagattttcttactaactcacanattccggcccagtca 628 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| | Sbjct: 770 cctacattaacatcaacgtagtaagattttcttagtaactcacaaattccggcccagtaa 829 Query: 629 gtagatatatatatgtacgtctctttctcgca-tgcagagcatctgctgntagcttatca 687 |||||||||||||||||||||| ||| ||| || ||||||||||||| ||||||||| Sbjct: 830 gtagatatatatatgtacgtcttttttcggcattgtagagcatctgctgtaagcttatca 889 Query: 688 gctgtcattactatctgcctcgtcagcattgatgaagacccggctcatatctcatt 743 |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 890 gctgtcattactttctgctcggtcagcattgatgaaaacccggctcatatctcatt 945 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7428 Number of Sequences: 1807 Number of extensions: 7428 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)