BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZB07FM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1570 1302 0.0 >3x_Contig1570 Length = 12233 Score = 1302 bits (657), Expect = 0.0 Identities = 729/744 (97%), Gaps = 7/744 (0%) Strand = Plus / Plus Query: 86 tgacgttgtaaacggtatcgtagaaagagcgactggtttttatcgagtaaacaatgggta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7638 tgacgttgtaaacggtatcgtagaaagagcgactggtttttatcgagtaaacaatgggta 7697 Query: 146 ttaaggagaatcgtgacgttcatatttctaatttaaggctaaaggccttggctgtggtga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7698 ttaaggagaatcgtgacgttcatatttctaatttaaggctaaaggccttggctgtggtga 7757 Query: 206 cagttttgttgtttttatgtggtttgcatttatccagatggtcaaggaccttgaaagata 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7758 cagttttgttgtttttatgtggtttgcatttatccagatggtcaaggaccttgaaagata 7817 Query: 266 atcagactgcaagtgaaccattgtgtccaaacgcaccaaatttgaaaccgccttcataca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7818 atcagactgcaagtgaaccattgtgtccaaacgcaccaaatttgaaaccgccttcataca 7877 Query: 326 tcaatgataactcgaccttggaaatgatcacacacgatgtcgaatatcgtagcgatgccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7878 tcaatgataactcgaccttggaaatgatcacacacgatgtcgaatatcgtagcgatgccg 7937 Query: 386 ttgagaaactattaggatccgttagaattcctactgaatcgtatgattctcatctagatc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7938 ttgagaaactattaggatccgttagaattcctactgaatcgtatgattctcatctagatc 7997 Query: 446 ctattgaatttcctaaggtatatgaaaacttcacagtgttacatgactatttccgtaaga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7998 ctattgaatttcctaaggtatatgaaaacttcacagtgttacatgactatttccgtaaga 8057 Query: 506 cgtaccctgcagtgcataagactttgaaacttgatgaaactaaatacaaatacaatttgg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8058 cgtaccctgcagtgcataagactttgaaacttgatgaaactaaatacaaatacaatttgg 8117 Query: 566 tttacgtttgggaggggaaagatgctagtttaaagcctttagttntagcaggacatcaag 625 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 8118 tttacgtttgggaggggaaagatgctagtttaaagcctttagttttagcaggacatcaag 8177 Query: 626 atgtcgtgcctgtcaatgcagataccatagatcaatggngggtatccaccatacaatggt 685 |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 8178 atgtcgtgcctgtcaatgcagaaaccatagatcaatgg-gggtatccaccatacaatggt 8236 Query: 686 acgtttgatggcgagaatcttttc-gtagaagtgttgctgattgc-aagctttggtcaat 743 |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 8237 acgtttgatggcgagaatcttttcggtagaggtgttgctgattgcaaagctttggtcaat 8296 Query: 744 tcgttttttg-atcattgggaatatt-attaagggcggattcc-accaaagcgtactgtg 800 ||| |||||| |||| ||| | |||| |||||||||||||||| |||||||||||||||| Sbjct: 8297 tcggtttttgaatcagtggaattattaattaagggcggattccaaccaaagcgtactgtg 8356 Query: 801 atctttgc-tttggatttgacgaa 823 ||||| || ||||||||||||||| Sbjct: 8357 atcttggcatttggatttgacgaa 8380 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5585 Number of Sequences: 1807 Number of extensions: 5585 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)