BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZB07RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1454 1350 0.0 >3x_Contig1454 Length = 9243 Score = 1350 bits (681), Expect = 0.0 Identities = 731/744 (98%), Gaps = 3/744 (0%) Strand = Plus / Plus Query: 48 atcaagaagtagcttctgtacatcttcaatttcgttattgagtttcgcatcatatttgac 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3201 atcaagaagtagcttctgtacatcttcaatttcgttattgagtttcgcatcatatttgac 3260 Query: 108 attaacaaatggtttgaacgtgatagaatcgaacgctaagaagatctgtaagtttttata 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3261 attaacaaatggtttgaacgtgatagaatcgaacgctaagaagatctgtaagtttttata 3320 Query: 168 cccaaatatttgttcagaatcaccataaataggatacgtgaaggttggcttgaagttaac 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3321 cccaaatatttgttcagaatcaccataaataggatacgtgaaggttggcttgaagttaac 3380 Query: 228 tgccccattttcatcaactaaggagagattaagggcttcattagaagatacagtccatgt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3381 tgccccattttcatcaactaaggagagattaagggcttcattagaagatacagtccatgt 3440 Query: 288 ttcaggtcttaaatcaacagccatattttcagagagtcaatgcttctcagttgagtacag 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3441 ttcaggtcttaaatcaacagccatattttcagagagtcaatgcttctcagttgagtacag 3500 Query: 348 ctttccctgttcctattattgctttcgcgtctcttgattataatctggcattttatttca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3501 ctttccctgttcctattattgctttcgcgtctcttgattataatctggcattttatttca 3560 Query: 408 gcttttttctttatttccttcataatttaagaaggtaaagcttgaccacttcataatggt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3561 gcttttttctttatttccttcataatttaagaaggtaaagcttgaccacttcataatggt 3620 Query: 468 agagtagttgggcatagaggcaaagcaattaaaatagatatataatcaaacctcgtgtca 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3621 agagtagttgggcatagaggcaaagcaattaaaatagatatataatcaaacctcgtgtca 3680 Query: 528 actgttgattactatgttccagaatttatttggattactttaggtatatttccagtgaaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3681 actgttgattactatgttccagaatttatttggattactttaggtatatttccagtgaaa 3740 Query: 588 tctgctacgatatagagtaaacgtctgacatanattggtagatttttgacggttgccatg 647 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3741 tctgctacgatatagagtaaacgtctgacataaattggtagatttttgacggttgccatg 3800 Query: 648 aagatattcggtgttgcaggctttcgcgagtctggtcaatatgatcttgcctcgaacaag 707 |||| |||||||||||| | ||| ||||||||||||||||||||||||||||||||||| Sbjct: 3801 aagaaattcggtgttgcggccttcggcgagtctggtcaatatgatcttgcctcgaacaag 3860 Query: 708 ttaggctcacagaatattgaattgaatgagcagctttcaattctttcaagttaaaactat 767 |||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 3861 ttaggctcacagaataatgaattgaatgagcagctttcaa-tctttcaagtt-aaactag 3918 Query: 768 gggaatttgcccaggccacataat 791 |||||||| |||||| ||||||| Sbjct: 3919 tggaatttg-ccaggcaacataat 3941 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8672 Number of Sequences: 1807 Number of extensions: 8672 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)