BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZB09RM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1645 1334 0.0 >3x_Contig1645 Length = 12736 Score = 1334 bits (673), Expect = 0.0 Identities = 794/827 (96%), Gaps = 6/827 (0%) Strand = Plus / Plus Query: 47 attactcgggtatcaatattcaaagtgttaaatggattgaagatataaggtatggtaaat 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10260 attactcgggtatcaatattcaaagtgttaaatggattgaagatataaggtatggtaaat 10319 Query: 107 ggtactcgtttgctaatgcagcaggatttgttgtaatagagaaattaggtagttaaataa 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10320 ggtactcgtttgctaatgcagcaggatttgttgtaatagagaaattaggtagttaaataa 10379 Query: 167 aaagaacttctaacaaatgatttgcaactcgctgtcatgtttaatatttatgtaaagatg 226 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10380 aaagaacttctaacaaatgatttgcaactcgctgtcatgtttaatatttaggtaaagatg 10439 Query: 227 gatttatctcatcaatatacttgaaaaacccacctttaacatctttgacatctttcaaat 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10440 gatttatctcatcaatatacttgaaaaacccacctttaacatctttgacatctttcaaat 10499 Query: 287 tgaatttatctttcaatagcctggttgcgagctgcgaatcatttccgtatctgcaaagca 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10500 tgaatttatctttcaatagcctggttgcgagctgcgaatcatttccgtatctgcaaagca 10559 Query: 347 ctaatacttcagaatctgctgaaaggtggggtattttggattggagattattcagatctg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10560 ctaatacttcagaatctgctgaaaggtggggtattttggattggagattattcagatctg 10619 Query: 407 ctggtaaatctctaagttcattcacagtgatattatgtgaatttggtaggtgtgatatgg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10620 ctggtaaatctctaagttcattcacagtgatattatgtgaatttggtaggtgtgatatgg 10679 Query: 467 aataatgaagacttggtctgacatcaagcaaaacgtaaggcttggtctttgatgaattcc 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10680 aataatgaagacttggtctgacatcaagcaaaacgtaaggcttggtctttgatgaattcc 10739 Query: 527 agtaatcccgttcatatttatgcacatcgattctttcgtcctcagttaaaacactatagt 586 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10740 agtaatcccgttcaaatttatgcacatcgattctttcgtcctcagttaaaacactatagt 10799 Query: 587 tacagctaccgcagaatgatttgat-atttattttgcctgattcgatagattctcttgtt 645 ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 10800 tacggctaccgcagaatga-ttgataatttattttgcctgattcgatagattctcttgtt 10858 Query: 646 acagtcctgcctgtttcacaagctggacaatctaccctnctacccctcattttgaactta 705 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10859 acagtcctgcctgttccacaagctggacaatctaccctcctacccctcattttgaactta 10918 Query: 706 cngagagtctgatcagggtaaccaggattcttgagtagaatcgctttgaaattctttctg 765 | |||||||||||||||| |||||| || || ||||||| || ||||| |||| |||| Sbjct: 10919 cggagagtctgatcagggaaaccagaatactgaagtagaaacggcttgaagttctctctg 10978 Query: 766 ttgtacacgccaagtaatagctttaatggctttaacc-ccattggcaaaccatcatgccc 824 |||||||||||||||||||||||||| |||| |||| |||||| || |||| || |||| Sbjct: 10979 gtgtacacgccaagtaatagctttaat-gcttcaaccaccattgccacaccaacaagccc 11037 Query: 825 -acgcaaggttctaagaaacccacctttttggcaggatgaccccgaa 870 ||||| ||| |||||| | ||||||| ||||||||||||| ||||| Sbjct: 11038 aacgcagggtcctaagaca-ccaccttcttggcaggatgacaccgaa 11083 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7710 Number of Sequences: 1807 Number of extensions: 7710 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)