BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC37ZB12FM1.SCF screened BAC_end
         (974 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1588                                                        1217   0.0  

>3x_Contig1588 
          Length = 14692

 Score = 1217 bits (614), Expect = 0.0
 Identities = 699/722 (96%), Gaps = 4/722 (0%)
 Strand = Plus / Minus

                                                                        
Query: 89   tgtcacaattgactagagaagacccctcccttgtggtaacacatgatgaggagactggac 148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8547 tgtcacaattgactagagaagacccctcccttgtggtaacacatgatgaggagactggac 8488

                                                                        
Query: 149  aaactttgttgagcggtatgggggatttacacttggatattgcgagagatagactattga 208
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8487 aaactttgttgagcggtatgggggagttacacttggatattgcgagagatagactattga 8428

                                                                        
Query: 209  acgaattaaatgcactagctgatgtagaaagagttattgtctcctacaaagaaacattaa 268
            ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8427 acgaattaaatgcacaagttgatgttgaaagagttattgtctcctacaaagaaacattaa 8368

                                                                        
Query: 269  atcattctacccaagaaaaaacgttggaaaccgatgatggatacaagattaccgctgtaa 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8367 atcattctacccaagaaaaaacgttggaaaccgatgatggatacaagattaccgctgtaa 8308

                                                                        
Query: 329  tcgagccattggacgaagagatgaaagctaaagcgaagaaggacgaagaatggttctcgt 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8307 tcgagccattggacgaagagatgaaagctaaagcgaagaaggacgaagaatggttctcgt 8248

                                                                        
Query: 389  tagcgaatgataataatttcatgatcatggaaaagcacaccaagtatgacccggataaaa 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8247 tagcgaatgataataatttcatgatcatggaaaagcacaccaagtatgacccggataaaa 8188

                                                                        
Query: 449  actggcctttccaagtgccttatgttgctgtcgtgaatgcgttattaccaagttctctag 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8187 actggcctttccaagtgccttatgttgctgtcgtgaatgcgttattaccaagttctctag 8128

                                                                        
Query: 509  ttgcattacaaagaggaggtaagatcggtgggttcccattgagctcttgtgtcattcgca 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8127 ttgcattacaaagaggaggtaagatcggtgggttcccattgagctcttgtgtcattcgca 8068

                                                                        
Query: 569  ttaaaaatgactgggatcttccaattgatgcgccatcgatttcaccattgttgactttta 628
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8067 ttaaaaatgactgggatcttccaattgatgcgccatcgatttcaccattgttgactttaa 8008

                                                                        
Query: 629  gcagacagctatttactcagatacttttaagagaagatcaatctaactactctgttttag 688
            ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 8007 gcagacagctatttactcagatactcttaggagaagatcaatctaactactctgttttag 7948

                                                                        
Query: 689  aaccagtcatgattgtcgatgtcactgtccaacagcaagactggggaccttgtttttcaa 748
            |||||||||||| ||||||||||||||| ||||||||||||  |||||| |||| |||||
Sbjct: 7947 aaccagtcatgaatgtcgatgtcactgttcaacagcaagacatgggacc-tgttattcaa 7889

                                                                        
Query: 749  gatttggtctatggcaagaaaagcaaattttcttgccttttggaaaatgagaatactaat 808
            ||| | |||||  |||||||||||||| | ||||| || || ||| ||||||||||||||
Sbjct: 7888 gatct-gtctagtgcaagaaaagcaaa-tatcttgtctatt-gaagatgagaatactaat 7832

              
Query: 809  ac 810
            ||
Sbjct: 7831 ac 7830


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6558
Number of Sequences: 1807
Number of extensions: 6558
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 974
length of database: 10,358,551
effective HSP length: 16
effective length of query: 958
effective length of database: 10,329,639
effective search space: 9895794162
effective search space used: 9895794162
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)