BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZB12FM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1588 1217 0.0 >3x_Contig1588 Length = 14692 Score = 1217 bits (614), Expect = 0.0 Identities = 699/722 (96%), Gaps = 4/722 (0%) Strand = Plus / Minus Query: 89 tgtcacaattgactagagaagacccctcccttgtggtaacacatgatgaggagactggac 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8547 tgtcacaattgactagagaagacccctcccttgtggtaacacatgatgaggagactggac 8488 Query: 149 aaactttgttgagcggtatgggggatttacacttggatattgcgagagatagactattga 208 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 8487 aaactttgttgagcggtatgggggagttacacttggatattgcgagagatagactattga 8428 Query: 209 acgaattaaatgcactagctgatgtagaaagagttattgtctcctacaaagaaacattaa 268 ||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||| Sbjct: 8427 acgaattaaatgcacaagttgatgttgaaagagttattgtctcctacaaagaaacattaa 8368 Query: 269 atcattctacccaagaaaaaacgttggaaaccgatgatggatacaagattaccgctgtaa 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8367 atcattctacccaagaaaaaacgttggaaaccgatgatggatacaagattaccgctgtaa 8308 Query: 329 tcgagccattggacgaagagatgaaagctaaagcgaagaaggacgaagaatggttctcgt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8307 tcgagccattggacgaagagatgaaagctaaagcgaagaaggacgaagaatggttctcgt 8248 Query: 389 tagcgaatgataataatttcatgatcatggaaaagcacaccaagtatgacccggataaaa 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8247 tagcgaatgataataatttcatgatcatggaaaagcacaccaagtatgacccggataaaa 8188 Query: 449 actggcctttccaagtgccttatgttgctgtcgtgaatgcgttattaccaagttctctag 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8187 actggcctttccaagtgccttatgttgctgtcgtgaatgcgttattaccaagttctctag 8128 Query: 509 ttgcattacaaagaggaggtaagatcggtgggttcccattgagctcttgtgtcattcgca 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8127 ttgcattacaaagaggaggtaagatcggtgggttcccattgagctcttgtgtcattcgca 8068 Query: 569 ttaaaaatgactgggatcttccaattgatgcgccatcgatttcaccattgttgactttta 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 8067 ttaaaaatgactgggatcttccaattgatgcgccatcgatttcaccattgttgactttaa 8008 Query: 629 gcagacagctatttactcagatacttttaagagaagatcaatctaactactctgttttag 688 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 8007 gcagacagctatttactcagatactcttaggagaagatcaatctaactactctgttttag 7948 Query: 689 aaccagtcatgattgtcgatgtcactgtccaacagcaagactggggaccttgtttttcaa 748 |||||||||||| ||||||||||||||| |||||||||||| |||||| |||| ||||| Sbjct: 7947 aaccagtcatgaatgtcgatgtcactgttcaacagcaagacatgggacc-tgttattcaa 7889 Query: 749 gatttggtctatggcaagaaaagcaaattttcttgccttttggaaaatgagaatactaat 808 ||| | ||||| |||||||||||||| | ||||| || || ||| |||||||||||||| Sbjct: 7888 gatct-gtctagtgcaagaaaagcaaa-tatcttgtctatt-gaagatgagaatactaat 7832 Query: 809 ac 810 || Sbjct: 7831 ac 7830 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6558 Number of Sequences: 1807 Number of extensions: 6558 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)