BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZB12RM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1794 1110 0.0 >3x_Contig1794 Length = 36744 Score = 1110 bits (560), Expect = 0.0 Identities = 609/622 (97%), Gaps = 3/622 (0%) Strand = Plus / Plus Query: 46 cttgtttctcattttcgaacttcgcccagtagggataatctgtttcaaactccaaatcca 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23190 cttgtttctcattttcgaacttcgcccagtagggataatctgtttcaaactccaaatcca 23249 Query: 106 aacctttgtatctccaagcatgtagatatagctctaacgattctggagttggatcttttg 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23250 aacctttgtatctccaagcatgtagatatagctctaacgattctggagttggatcttttg 23309 Query: 166 gcatttcttcgtcgcattcaggacatcgttcttgattttcattcaattgatcccatacat 225 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 23310 gcatttcttcgtcgcattcaggacatcgttcttgattttcattcaattgatcccagacat 23369 Query: 226 catccagttcaacctcgaaccgcttccgtagcttttcgattctttcgtttgttagttgag 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23370 catccagttcaacctcgaaccgcttccgtagcttttcgattctttcgtttgttagttgag 23429 Query: 286 tccaatctggggtctcaataataaaccttgaccgtaatgggtacgttgagttatcaaggt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23430 tccaatctggggtctcaataataaaccttgaccgtaatgggtacgttgagttatcaaggt 23489 Query: 346 tataaaacggatcgtttgtaatggggtgtccctgtcttgccaaatggatacgaatttgat 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23490 tataaaacggatcgtttgtaatggggtgtccctgtcttgccaaatggatacgaatttgat 23549 Query: 406 gtgttcttcccgtgaaaggtttgcatactacaattgattgatcagttacggcatcgtatt 465 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 23550 gtgttcttcccgtgaaaggtttgcataatacaattgattgatcagttacggcatcgtatt 23609 Query: 466 ccattaattcaaactcagtatgtgcgtctttcaaa-gggataatggctctgatttatttt 524 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 23610 ccattaattcaaactcagtatgtgcgtctttcaaaggggataatggctctgatttaattt 23669 Query: 525 tc-agtcacaggtttagattggggatttatcaactgcagtttcagggaaattttcctttt 583 || |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 23670 tcaagtcacaggtatagattggggatttatcaactgcagtttca-ggaaattttcctttt 23728 Query: 584 actctagctagattatatttcttcttataacgatctcttatcttanattgnactctgtta 643 ||||||||||||| |||||||||| ||| |||||||||||||||| |||| ||||||||| Sbjct: 23729 actctagctagataatatttcttcatatcacgatctcttatcttagattgaactctgtta 23788 Query: 644 gcatccatgggatttttggcca 665 ||||| |||||||||||||||| Sbjct: 23789 gcatcgatgggatttttggcca 23810 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 18,558 Number of Sequences: 1807 Number of extensions: 18558 Number of successful extensions: 2605 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)