BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZC10FM1.SCF screened BAC_end (903 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1078 1402 0.0 >3x_Contig1078 Length = 3134 Score = 1402 bits (707), Expect = 0.0 Identities = 798/818 (97%), Gaps = 8/818 (0%) Strand = Plus / Plus Query: 89 aaagagacttgggcagtcatcacgttcaaaaacctaatgaattggatgttacttccaatc 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 aaagagacttgggcagtcatcacgttcaaaaacctaatgaattggatgttacttccaatc 783 Query: 149 ctactggtgatatctcaaagatgtcagaatccaaacgtttaaaacaaaacgctcaaccag 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 ctactggtgatatctcaaagatgtcagaatccaaacgtttaaaacaaaacgctcaaccag 843 Query: 209 atacaaaaccatacagacttatcgtgctagtgagcatgccatatgatgggaaacgaacga 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 atacaaaaccatacagacttatcgtgctagtgagcatgccatatgatgggaaacgaacga 903 Query: 269 aattcttcactttggtagattcaaagactcttgataaattttggaaggattatgttaatg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 aattcttcactttggtagattcaaagactcttgataaattttggaaggattatgttaatg 963 Query: 329 ttgtaaaaacaagtatgtctggattaattaaaaagaagaagaagaagaagggtggtaaga 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 ttgtaaaaacaagtatgtctggattaattaaaaagaagaagaagaagaagggtggtaaga 1023 Query: 389 aaaactgatgaaatattcccaacctattatcacccatgaatcataaatccgcaatcgtgt 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 aaaactgatgaaatattcccaacctattatcacccatgaatcataaatccgcaatcgtgt 1083 Query: 449 agcattataaagtacatgttatatatacatatatagatgtcaaactgcaaaccagtaatt 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 agcattataaagtacatgttatatatacatatatagatgtcaaactgcaaaccagtaatt 1143 Query: 509 tggttttcattcgaactccacgacaattgttcccgatggataaattgtccgttcttcctt 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 tggttttcattcgaactccacgacaattgttcccgatggataaattgtccgttcttcctt 1203 Query: 569 gatcactgtggttggctccaaacgggttctgggcacaggtgaatatagttgaaagtcata 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1204 gatcactgtggttggctccaaacgggttctgggcacaggtgaatatagttgaaagtcata 1263 Query: 629 ctgatactcgtaatttggtttttcttgtgtaatatcattctcgctgctagtgtcagataa 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1264 ctgatactcgtaatttggtttttcttgtgtaatatcattctcgctgctagtgtcagataa 1323 Query: 689 t-aacctgctctgtataaatgc-acgtatgcgtaaaatct-ctcaattgtt-atgaagca 744 | |||||||||||||| ||||| |||||||||| |||||| |||||||||| |||||||| Sbjct: 1324 taaacctgctctgtat-aatgcaacgtatgcgt-aaatctcctcaattgttaatgaagca 1381 Query: 745 tcaaatcctctaataattctttcattttctagcctgatgcttactctgcaaccgtcaccc 804 ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1382 tcaaatcttctaataattctttcattttctagtctgatgcttactctgcaaccgtcaccc 1441 Query: 805 gatggttctggcactagtacanatttttttcaagccaa-catttctttttaagatggcct 863 ||||||||||||||||||||| ||||| | |||||||| |||||||||||||| ||| || Sbjct: 1442 gatggttctggcactagtacagattttctccaagccaaccatttctttttaagttgg-ct 1500 Query: 864 ttcttcgataacccattccctttctgggtccctttcta 901 ||| ||||| |||| |||||||| |||||||||||| Sbjct: 1501 ttcctcgattaccctatccctttcctggtccctttcta 1538 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8464 Number of Sequences: 1807 Number of extensions: 8464 Number of successful extensions: 378 Number of sequences better than 1.0e-20: 1 length of query: 903 length of database: 10,358,551 effective HSP length: 16 effective length of query: 887 effective length of database: 10,329,639 effective search space: 9162389793 effective search space used: 9162389793 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)