BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZC10RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1316 1425 0.0 >3x_Contig1316 Length = 8178 Score = 1425 bits (719), Expect = 0.0 Identities = 808/835 (96%), Gaps = 2/835 (0%) Strand = Plus / Minus Query: 48 aatgttaggcgtattatctacagagaaagagggacgatagatataaaaaaatgaatggtt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6320 aatgttaggcgtattatctacagagaaagagggacgatagatataaaaaaatgaatggtt 6261 Query: 108 tgaaggtcgaatatgaaatcgataaattaatagagattgtggatgagagagacaggttaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6260 tgaaggtcgaatatgaaatcgataaattaatagagattgtggatgagagagacaggttaa 6201 Query: 168 tggatgtccttcacatgcaaccatctaaaaatgataacataaaacttaagaaacatataa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6200 tggatgtccttcacatgcaaccatctaaaaatgataacataaaacttaagaaacatataa 6141 Query: 228 accatacacttgatttgctcaaagattatgaagatgatgtacccttttctgaagatgata 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6140 accatacacttgatttgctcaaagattatgaagatgatgtacccttttctgaagatgata 6081 Query: 288 gatttaatcatcagattaaaacttataatgatatcattgaaggcttgccagaaacagtca 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6080 gatttaatcatcagattaaaacttataatgatatcattgaaggcttgccagaaacagtca 6021 Query: 348 ttgacaaggaactctatagattcaaaagaaagcctaatctgagagaaacaaagaaggtac 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6020 ttgacaaggaactctatagattcaaaagaaagcctaatctgagagaaacaaagaaggtac 5961 Query: 408 ggtttaaagacggattagttgaagagcataaagaacccgaacagaagtttaaaccatata 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5960 ggtttaaagacggattagttgaagagcataaagaacccgaacagaagtttaaaccatata 5901 Query: 468 aagatgatgagtcttcatctacagttgtagatgatttattggaggtcaagagataggaat 527 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5900 aagatgatgagtcttcatctacagttgtagatgatttattggaggtcaagagaaaggaat 5841 Query: 528 tatttggaaatcaagagacaggaactccaaaatacaatatttctccacaagtttcaaatc 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5840 tatttggaaatcaagagacaggaactccaaaatacaatatttctccacaagtttcaaatc 5781 Query: 588 aggatattttcattcaacaacagcagcaattgatggaacaagagagccatctagaaaacc 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5780 aggatattttcattcaacaacagcagcaattgatggaacaagagagccatctagaaaacc 5721 Query: 648 tgtcaagttctattaatatgacacaagggatatctatcgagattaacgatgaggtagaac 707 |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5720 tgtcaagttctattaataggacacaaggaatatctatcgagattaacgatgaggtagaac 5661 Query: 708 agcaaaatgaacatcctcttaacggatattgagcgccaagtagattcgagtgaaagtcat 767 |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5660 agcaaaatgaacat-ctcttaacggatattgagcgccaagtagatcgaagtgaaagtcat 5602 Query: 768 ttacaaaggcctgggagaagacttaatgctttccatccaccacttcggaagaaaggccct 827 ||||||||| ||||||||||||||||||||| | | || || ||| ||||||||||| Sbjct: 5601 ttacaaagggctgggagaagacttaatgcttacgaagcaacagctcgtgagaaaggccct 5542 Query: 828 tgccttctaaatggggattcttcctttaatactatcccttttagatataaattga 882 || |||| ||| | ||||||| || ||||||||| |||||||| ||||| |||| Sbjct: 5541 tg-cttcctaattgtgattctttctataatactattccttttagttataatttga 5488 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8386 Number of Sequences: 1807 Number of extensions: 8386 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)