BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZC11FM1.SCF screened BAC_end (906 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 1392 0.0 >3x_Contig1640 Length = 15521 Score = 1392 bits (702), Expect = 0.0 Identities = 751/767 (97%), Gaps = 1/767 (0%) Strand = Plus / Plus Query: 85 ttgtcaattcgacgttctatgaactaggtccaacgtttcctatctagttgaaggtagccc 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11345 ttgtcaattcgacgttctatgaactaggtccaacgtttcctatctagttgaaggtagccc 11404 Query: 145 tacgtttgaagtcgttattgttttcttgctaaatactatgatcctccctattattgttat 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11405 tacgtttgaagtcgttattgttttcttgctaaatactatgatcctccctattattgttat 11464 Query: 205 ttttattgtaacaatcgcactttctttattttcaacactaattcaaggttaaaagacaaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11465 ttttattgtaacaatcgcactttctttattttcaacactaattcaaggttaaaagacaaa 11524 Query: 265 cgttctagacgcatataactgcattcagttcaggcattgatctcgagcgttaacaaacta 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11525 cgttctagacgcatataactgcattcagttcaggcattgatctcgagcgttaacaaacta 11584 Query: 325 gttggacaatttcagatgctcataaattgctgaagatccaggaatgttcagcacctcgaa 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11585 gttggacaatttcagatgctcataaattgctgaagatccaggaatgttcagcacctcgaa 11644 Query: 385 aggtagtatgtcagttcaaccaatatcgtaaaatagtgactgaagttttcttcacgtgac 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11645 aggtagtatgtcagttcaaccaatatcgtaaaatagtgactgaagttttcttcacgtgac 11704 Query: 445 ccatatctgtgaacggaggtttcaatattaattataacaaagacgatcctgggttggcag 504 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11705 ccagatctgtgaacggaggtttcaatattaattataacaaagacgatcctgggttggcag 11764 Query: 505 ataaaaactcggatcccttcactgcaaagtttatacacaaaaccatattccctcatttgt 564 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11765 agaaaaactcggatcccttcactgcaaagtttatacacaaaaccatattccctcatttgt 11824 Query: 565 cccaaacttcgtttcacgatggacaggccatggatactattcatagctgaacctgaatac 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11825 cccaaacttcgtttcacgatggacaggccatggatactattcatagctgaacctgaatac 11884 Query: 625 agtttacaggaatataagcttttgcaaaaagagttcaacacggttaattacacacttgaa 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11885 agtttacaggaatataagcttttgcaaaaagagttcaacacggttaattacacacttgaa 11944 Query: 685 cgatatgttgatggcactggtaaagaagcatttctaactttcttggaccagcatttcgag 744 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 11945 cgagatgttgatggcactggtaaggaagcatttctaactttcttggaccagcattcgaag 12004 Query: 745 cantagggtccaattgtcggaatatttggatggta-ncacatttcgctccctttagtggn 803 || |||||||||||||||||||||||||| |||| |||| ||||||||||| |||| Sbjct: 12005 caaaagggtccaattgtcggaatatttggagggtatccacaattcgctcccttaggtggt 12064 Query: 804 ttgagtgcagaaatcttggatgatcatcgttggcctgggtcgatcaa 850 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12065 ttgagtgcagaaatcttggatgatcatcgttggcctgggtcgatcaa 12111 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5751 Number of Sequences: 1807 Number of extensions: 5751 Number of successful extensions: 29 Number of sequences better than 1.0e-20: 1 length of query: 906 length of database: 10,358,551 effective HSP length: 16 effective length of query: 890 effective length of database: 10,329,639 effective search space: 9193378710 effective search space used: 9193378710 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)