BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZD06FM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1686 975 0.0 >3x_Contig1686 Length = 15382 Score = 975 bits (492), Expect = 0.0 Identities = 511/517 (98%), Gaps = 1/517 (0%) Strand = Plus / Plus Query: 255 agcttaagattcaaacgtgcaccagattccgtcgcattaaacgaattatatattgtagtc 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcttaagattcaaacgtgcaccagattccgtcgcattaaacgaattatatattgtagtc 60 Query: 315 tttgattactacaaaagcaaactttcacctgacgagtacagagagttagtggtaaaatgt 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tttgattactacaaaagcaaactttcacctgacgagtacagagagttagtggtaaaatgt 120 Query: 375 tacaagtattattgtgatttcttgaaaaatcatgttaatacttatcttcaatggagaata 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tacaagtattattgtgatttcttgaaaaatcatgttaatacttatcttcaatggagaata 180 Query: 435 gacacaagcattttgagaactatgattcaccgcgccaaatttgatattaaggatgataga 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gacacaagcattttgagaactatgattcaccgcgccaaatttgatattaaggatgataga 240 Query: 495 cttgcatatgaaatgttaatgaatttttatgcaatgaatttgaatccaagatttgattct 554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cttgcatatgaaatgttaatgaatttttatgcaatgaatttgaatccaagatttgattct 300 Query: 555 aaaaacactccatttggtcttgtcttgtaccggaatgatgcaataaatcaacaggaattt 614 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 301 aaaaacactccatttggtcttgtcttgtaccggaatgaggcaataaatcaacaggaattt 360 Query: 615 aatcaagtgcttgaattaatgcaaagatgtanggcaccaatggatcataaaattattatt 674 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 361 aatcaagtgcttgaattaatgcaaagatgtagggcaccaatggatcataaaattattatt 420 Query: 675 accatcgtcttgaaattcattaaatcangcaatatcgacttggcacatgaatggtatact 734 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 421 accatcgtcttgaaattcattaaatcaggcaatatcgacttggcacatgaatggtatact 480 Query: 735 cggntactt-agacaggatatccacttcgtcatttca 770 ||| ||||| |||||||||||||||| |||||||||| Sbjct: 481 cggttacttaagacaggatatccactccgtcatttca 517 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7122 Number of Sequences: 1807 Number of extensions: 7122 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)