BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC37ZD12FM1.SCF screened BAC_end
(980 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1566 0.0
>3x_Contig1766
Length = 23951
Score = 1566 bits (790), Expect = 0.0
Identities = 875/898 (97%), Gaps = 4/898 (0%)
Strand = Plus / Plus
Query: 85 cttcatacaatacaccgtcatgagattaaattacgttttatcaaagaccttagctcttgc 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12549 cttcatacaatacaccgtcatgagattaaattacgttttatcaaagaccttagctcttgc 12608
Query: 145 ttccgttgtctctgctgctgccgttcataaacatcacgctgctgaagaaaaaagagacgt 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12609 ttccgttgtctctgctgctgccgttcataaacatcacgctgctgaagaaaaaagagacgt 12668
Query: 205 tactgtcgtcgtaacaaatttcgttgatcaaaatggtcaagtcttggttgacgggcaaac 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12669 tactgtcgtcgtaacaaatttcgttgatcaaaatggtcaagtcttggttgacgggcaaac 12728
Query: 265 aagtgcgacagatgccacaacgaccttgcaaccagttactgatattggtggtggaaaaag 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12729 aagtgcgacagatgccacaacgaccttgcaaccagttactgatattggtggtggaaaaag 12788
Query: 325 tgttgaaactacaacggtaacgtcatcatcaggttcatctagttctttatcgggttcctc 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12789 tgttgaaactacaacggtaacgtcatcatcaggttcatctagttctttatcgggttcctc 12848
Query: 385 aacctcttcctccggtggaaccagttctagttctagttccacttctagcagcagtgacgc 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12849 aacctcttcctccggtggaaccagttctagttctagttccacttctagcagcagtgacgc 12908
Query: 445 ttctagttcaagttctggtgaatatggtggtgctttgggtatcacttactctccatacac 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12909 ttctagttcaagttctggtgaatatggtggtgctttgggtatcacttactctccatacac 12968
Query: 505 cagcagtggttcttgtaagtcttcagacaccatcaaatccgacattcagaatttgtcaca 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12969 cagcagtggttcttgtaagtcttcagacaccatcaaatccgacattcagaatttgtcaca 13028
Query: 565 attcagtgtcattagaatctacgacactgactgtgacgcgatggaagcaattctatctca 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13029 attcagtgtcattagaatctacgacactgactgtgacgcgatggaagcaattctatctca 13088
Query: 625 attacaaagcggtcaaaagatctttgttggtatctacgacatcgataacattgcctccag 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13089 attacaaagcggtcaaaagatctttgttggtatctacgacatcgataacattgcctccag 13148
Query: 685 cgtcagtgcaatcgaatctgctttcatcggtgatttctccaaagtttacgctatttctgt 744
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 13149 cgtcagtgcaatcgaatctgctttcaacggtgatttctccaaggtttacgctatttctgt 13208
Query: 745 cggtaacgaactgatcaatgcatgatcgagtaccgtttctcaactgagtagcgctgttga 804
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 13209 cggtaacgaactgatcaatgcaggaacgagtaccgtttctcaactgagtagcgctgttga 13268
Query: 805 atcagctaaatctaaattgattgctattggct-cacaggtgacgttgtca-cggtgatac 862
|||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 13269 atcagctaaatctaaattgagtgctattggctacacaggtgacgttgtcaccgttgatac 13328
Query: 863 cctattggccaccg-aaacaactttggtct-tgccgtatgtcagattttattgcagttaa 920
|||| ||||||||| |||||||| |||||| ||| |||||||||||||||||||||||||
Sbjct: 13329 cctagtggccaccgaaaacaactctggtctatgcagtatgtcagattttattgcagttaa 13388
Query: 921 ctgtcatccataccggggatgtaatggggaatcctcccactgtggacccttggtgaaa 978
||||||||||||| ||| |||||| |||| | ||| |||||||||| | |||||||
Sbjct: 13389 ctgtcatccatactgggatggtaatgtggaaccatccaactgtggaccatgggtgaaa 13446
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6035
Number of Sequences: 1807
Number of extensions: 6035
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)