BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZE03RM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1730 1221 0.0 >3x_Contig1730 Length = 17223 Score = 1221 bits (616), Expect = 0.0 Identities = 709/731 (96%), Gaps = 7/731 (0%) Strand = Plus / Plus Query: 60 attgcaaag-atgggcttttagtgaggaagatttggacggaccaaatatctttcggtgct 118 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13929 attgcaaagtatgggcttttagtgaggaagatttggacggaccaaatatctttcggtgct 13988 Query: 119 aaactcgcggaacttctatgtcaacggactaggtcaaaaaaaagatgtagaagaaacact 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13989 aaactcgcggaacttctatgtcaacggactaggtcaaaaaaaagatgtagaagaaacact 14048 Query: 179 gcactcgctatttttctagcacaatgtctaaacccatcacaatccattgcatttgttttc 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14049 gcactcgctatttttctagcacaatgtctaaacccatcacaatccattgcatttgttttc 14108 Query: 239 ggaccctgtacagtagcaccaggtaaggttatctcaatggaccgaaaaaatcatatcagg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14109 ggaccctgtacagtagcaccaggtaaggttatctcaatggaccgaaaaaatcatatcagg 14168 Query: 299 cagcatagaaatatagaggaagacaaggatgtgaaatattggaaaccttctagagaattt 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14169 cagcatagaaatatagaggaagacaaggatgtgaaatattggaaaccttctagagaattt 14228 Query: 359 tacaataaaatgagtaagtccttaaagtttgctccatgcacggtattcgtcgcatccatg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14229 tacaataaaatgagtaagtccttaaagtttgctccatgcacggtattcgtcgcatccatg 14288 Query: 419 gatcaggtcggaatatgggagatgagatcctgtttgaacaactttattcaatacgaatcc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14289 gatcaggtcggaatatgggagatgagatcctgtttgaacaactttattcaatacgaatcc 14348 Query: 479 ttcaatgatagaaatttcatatatgattggcaggcgtatattcaagggaaaggatgttat 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14349 ttcaatgatagaaatttcatatatgattggcaggcgtatattcaagggaaaggatgttat 14408 Query: 539 gaaataaccagaattgttatcaaaacttct-acaagctattactgaatgggatctttggt 597 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14409 gaaataaccagaattgttatcaaaacttctaacaagctattactgaatgggatctttggt 14468 Query: 598 ccagtctcatccttg-aagac-atgacacacatgtatctgacacttcaaagggctttgga 655 ||||||||||||||| ||||| | ||||||||||||||||||||| |||||||||||||| Sbjct: 14469 ccagtctcatccttgaaagacaaggacacacatgtatctgacactccaaagggctttgga 14528 Query: 656 aggtctggaacctttcgttacaaatggcccagttgtaatctaccatcaattttgataagg 715 ||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 14529 gggtctggaaccttccgttacaaagggccaagtagtaatctaccatcaattttgataagt 14588 Query: 716 ttatcctgtggatacatctcgcaccgcttctgaagccctggcaggaaatg-cagaaaaat 774 |||| |||| ||||||||||||| |||| |||||| ||| ||| |||||| |||| |||| Sbjct: 14589 ttat-ctgttgatacatctcgcagcgctgctgaag-ccttgcaagaaatgccagataaat 14646 Query: 775 tttnctttcaa 785 ||| ||||||| Sbjct: 14647 tttcctttcaa 14657 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6682 Number of Sequences: 1807 Number of extensions: 6682 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)