BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC37ZE04RM1.SCF screened BAC_end
         (883 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1737                                                        1501   0.0  

>3x_Contig1737 
          Length = 17214

 Score = 1501 bits (757), Expect = 0.0
 Identities = 810/824 (98%), Gaps = 3/824 (0%)
 Strand = Plus / Minus

                                                                        
Query: 48   gacaacaccatctctcactggagtaccccatggatactgggcaatgtaagtcaaaggaga 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7752 gacaacaccatctctcactggagtaccccatggatactgggcaatgtaagtcaaaggaga 7693

                                                                        
Query: 108  tccgtagaagcttgctgccaaagtagcgtcaccatccaagtgttggagcaattgtttgta 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7692 tccgtagaagcttgctgccaaagtagcgtcaccatccaagtgttggagcaattgtttgta 7633

                                                                        
Query: 168  caacaattgggtccagatagcacctgacacagctgatccaacagctgagccgattctgta 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7632 caacaattgggtccagatagcacctgacacagctgatccaacagctgagccgattctgta 7573

                                                                        
Query: 228  catggtgtaactcaatgcggtgacagtggccatgttttcatgagaagtgacggattggag 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7572 catggtgtaactcaatgcggtgacagtggccatgttttcatgagaagtgacggattggag 7513

                                                                        
Query: 288  ggacacggtgactgggtaagtgaacatggtggtaccgagaccccaaacgactagcgcacc 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7512 ggacacggtgactgggtaagtgaacatggtggtaccgagaccccaaacgactagcgcacc 7453

                                                                        
Query: 348  gatgatacctttatcagaattttgaccggatctgaaatggaacaagatacccattgcgac 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7452 gatgatacctttatcagaattttgaccggatctgaaatggaacaagatacccattgcgac 7393

                                                                        
Query: 408  catccatagggaacaaccagcgatgatgaatggctttaatctggtgaatctagtgatgaa 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7392 catccatagggaacaaccagcgatgatgaatggctttaatctggtgaatctagtgatgaa 7333

                                                                        
Query: 468  tagcgcaaagaaaggcgaaaatacggtggaagtgaaggtactgacactggaaattctggt 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7332 tagcgcaaagaaaggcgaaaatacggtggaagtgaaggtactgacactggaaattctggt 7273

                                                                        
Query: 528  ggcagaagtgacactttcattcacagcaaccatcaagattgtgtacaagtaacctgcggc 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7272 ggcagaagtgacactttcattcacagcaaccatcaagattgtgtacaagtaacctgcggc 7213

                                                                        
Query: 588  catggtgaagatgaagttgatcaagaaggcaatacacaaagcagcccatataccacggtc 647
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7212 catggtgaagatgaagttgatcaagaaggcaatacacaaagcagcccaaataccacggtc 7153

                                                                        
Query: 648  tctcaacaacttgaatggagcaattggttcacgagcccatttggattcccatgcgantaa 707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 7152 tctcaacaacttgaatggagcaattggttcacgagcccatttggattcccatgcgataaa 7093

                                                                        
Query: 708  gaatgggatcaagacgaaaccctagatgaatggagcaatgatatgtggattggtccattt 767
            |||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||
Sbjct: 7092 gaatgggatcaagacgaaacctaagatgaatggagcaatgatatgtggattgttccattt 7033

                                                                        
Query: 768  gtttgagataccacctgctagagtcaatgggaccaagatacaaccaaggattaatattca 827
            |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 7032 gtttgagataccacctgctagagtcaatgggaccaagatacaaccaagga-taataatca 6974

                                                        
Query: 828  tggaggaaacaccaattgacgtcccatttttcaaaacaattgaa 871
            || || ||||||||| |||||| ||| ||| |||||||||||||
Sbjct: 6973 tgaagaaaacaccaa-tgacgt-ccaatttccaaaacaattgaa 6932


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5425
Number of Sequences: 1807
Number of extensions: 5425
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)