BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC37ZE06FM1.SCF screened BAC_end
         (946 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1506                                                        1402   0.0  

>3x_Contig1506 
          Length = 7652

 Score = 1402 bits (707), Expect = 0.0
 Identities = 808/834 (96%), Gaps = 7/834 (0%)
 Strand = Plus / Plus

                                                                        
Query: 85   atttatataaactatatagatatatatactctaataacaagaacaggaataacaattaca 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4739 atttatataaactatatagatatatatactctaataacaagaacaggaataacaattaca 4798

                                                                        
Query: 145  attacaattacaagacaaaagaaaaaagattattactaaacggctaaacgtaatttgcaa 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4799 attacaattacaagacaaaagaaaaaagattattactaaacggctaaacgtaatttgcaa 4858

                                                                        
Query: 205  tcaatccctttcttatttaagtgtgttgttttagtcaactttgatagaaatcaaatttga 264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4859 tcaatccctttcttatttaagtgtgttgttttagtcaactttgatagaaatcaaatttga 4918

                                                                        
Query: 265  acttccttttatttcgtttttttttttctttatacttgtttctttatttctcaacactgc 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4919 acttccttttatttcgtttttttttttctttatacttgtttctttatttctcaacactgc 4978

                                                                        
Query: 325  tgctatttttcctacagcgaacaaattttctttccgaaagagctgtcacagtatacatca 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4979 tgctatttttcctacagcgaacaaattttctttccgaaagagctgtcacagtatacatca 5038

                                                                        
Query: 385  cagtaagcatcacagtttctttataggaaaagaaaaatgaactgcaacagcactagacag 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5039 cagtaagcatcacagtttctttataggaaaagaaaaatgaactgcaacagcactagacag 5098

                                                                        
Query: 445  tgtgtagcaaaaagcatgactttcaagctcttgaatgtttcctagacagagagtagaaat 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5099 tgtgtagcaaaaagcatgactttcaagctcttgaatgtttcctagacagagagtagaaat 5158

                                                                        
Query: 505  tgcgtatattcgacgagtgactgtctgaatagcacctctaggtagtttttgctgttgcag 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5159 tgcgtatattcgacgagtgactgtctgaatagcacctctaggtagtttttgctgttgcag 5218

                                                                        
Query: 565  ttatcggtcgataccaattgaccgagtgatttatgtgatttatgtgtgtatctgtgttcc 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5219 ttatcggtcgataccaattgaccgagtgatttatgtgatttatgtgtgtatctgtgttcc 5278

                                                                        
Query: 625  ctcggggaaactacagtttgccagtatggttagcctctttttttggttcgacgtaagtta 684
            |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5279 ctcggggaaactacggtttgccagtagggttagcctctttttttggttcgacgtaagtta 5338

                                                                        
Query: 685  ttccgtttactgtgggaggcctgtaccctaggcataagctgatgtgatgtttgggtgagc 744
            ||||| |||||||||  |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5339 ttccggttactgtggagggcctgtacccttggcataagctgatgtgatgtttgggtgagc 5398

                                                                        
Query: 745  aattgtgatttaagatttattcgaagatcggacgggaagcatattagtagggtagcctta 804
            ||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||| ||
Sbjct: 5399 aattgtgatttaagagttaatcgaagatcggacgggaagcatataggtagggtagcc-ta 5457

                                                                        
Query: 805  ggttagcccagggtagcatagctttagaattataaaaaacactggggataggtagtattt 864
            || ||||||||||||||||||| |||||  ||| |||||||||| ||||||||||||  |
Sbjct: 5458 gggtagcccagggtagcatagc-ttagatatat-aaaaacactgtggataggtagta--t 5513

                                                                  
Query: 865  tttcgaagttggaaccgatattttctgggtccgttggcaaatttcgttttgaaa 918
            |||||||||||| |||||||  |||| ||| ||||||||||| |||||| ||||
Sbjct: 5514 tttcgaagttgg-accgata-attcttggttcgttggcaaatatcgtttggaaa 5565


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,364
Number of Sequences: 1807
Number of extensions: 13364
Number of successful extensions: 148
Number of sequences better than 1.0e-20: 1
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)