BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZE06FM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1506 1402 0.0 >3x_Contig1506 Length = 7652 Score = 1402 bits (707), Expect = 0.0 Identities = 808/834 (96%), Gaps = 7/834 (0%) Strand = Plus / Plus Query: 85 atttatataaactatatagatatatatactctaataacaagaacaggaataacaattaca 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4739 atttatataaactatatagatatatatactctaataacaagaacaggaataacaattaca 4798 Query: 145 attacaattacaagacaaaagaaaaaagattattactaaacggctaaacgtaatttgcaa 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4799 attacaattacaagacaaaagaaaaaagattattactaaacggctaaacgtaatttgcaa 4858 Query: 205 tcaatccctttcttatttaagtgtgttgttttagtcaactttgatagaaatcaaatttga 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4859 tcaatccctttcttatttaagtgtgttgttttagtcaactttgatagaaatcaaatttga 4918 Query: 265 acttccttttatttcgtttttttttttctttatacttgtttctttatttctcaacactgc 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4919 acttccttttatttcgtttttttttttctttatacttgtttctttatttctcaacactgc 4978 Query: 325 tgctatttttcctacagcgaacaaattttctttccgaaagagctgtcacagtatacatca 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4979 tgctatttttcctacagcgaacaaattttctttccgaaagagctgtcacagtatacatca 5038 Query: 385 cagtaagcatcacagtttctttataggaaaagaaaaatgaactgcaacagcactagacag 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5039 cagtaagcatcacagtttctttataggaaaagaaaaatgaactgcaacagcactagacag 5098 Query: 445 tgtgtagcaaaaagcatgactttcaagctcttgaatgtttcctagacagagagtagaaat 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5099 tgtgtagcaaaaagcatgactttcaagctcttgaatgtttcctagacagagagtagaaat 5158 Query: 505 tgcgtatattcgacgagtgactgtctgaatagcacctctaggtagtttttgctgttgcag 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5159 tgcgtatattcgacgagtgactgtctgaatagcacctctaggtagtttttgctgttgcag 5218 Query: 565 ttatcggtcgataccaattgaccgagtgatttatgtgatttatgtgtgtatctgtgttcc 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5219 ttatcggtcgataccaattgaccgagtgatttatgtgatttatgtgtgtatctgtgttcc 5278 Query: 625 ctcggggaaactacagtttgccagtatggttagcctctttttttggttcgacgtaagtta 684 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5279 ctcggggaaactacggtttgccagtagggttagcctctttttttggttcgacgtaagtta 5338 Query: 685 ttccgtttactgtgggaggcctgtaccctaggcataagctgatgtgatgtttgggtgagc 744 ||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5339 ttccggttactgtggagggcctgtacccttggcataagctgatgtgatgtttgggtgagc 5398 Query: 745 aattgtgatttaagatttattcgaagatcggacgggaagcatattagtagggtagcctta 804 ||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| || Sbjct: 5399 aattgtgatttaagagttaatcgaagatcggacgggaagcatataggtagggtagcc-ta 5457 Query: 805 ggttagcccagggtagcatagctttagaattataaaaaacactggggataggtagtattt 864 || ||||||||||||||||||| ||||| ||| |||||||||| |||||||||||| | Sbjct: 5458 gggtagcccagggtagcatagc-ttagatatat-aaaaacactgtggataggtagta--t 5513 Query: 865 tttcgaagttggaaccgatattttctgggtccgttggcaaatttcgttttgaaa 918 |||||||||||| ||||||| |||| ||| ||||||||||| |||||| |||| Sbjct: 5514 tttcgaagttgg-accgata-attcttggttcgttggcaaatatcgtttggaaa 5565 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,364 Number of Sequences: 1807 Number of extensions: 13364 Number of successful extensions: 148 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)