BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZE08FM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1335 1306 0.0 >3x_Contig1335 Length = 8696 Score = 1306 bits (659), Expect = 0.0 Identities = 736/758 (97%), Gaps = 3/758 (0%) Strand = Plus / Minus Query: 89 catattaatcagattttctcacttaaaacactaagatactatgtcaattcctagtaaatc 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5995 catattaatcagattttctcacttaaaacactaagatactatgtcaattcctagtaaatc 5936 Query: 149 ctactaatttgcttctgaactttattgatctcgcgtaaacacttacctgaggacatatgc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5935 ctactaatttgcttctgaactttattgatctcgcgtaaacacttacctgaggacatatgc 5876 Query: 209 ttcgatcattagacagatctctttgtattctgtacttttccaaggtttcgacacgatttt 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5875 ttcgatcattagacagatctctttgtattctgtacttttccaaggtttcgacacgatttt 5816 Query: 269 tttcgattctaaatagagaatttccgaaaacggtagataaacgtgactatcatgtggata 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5815 tttcgattctaaatagagaatttccgaaaacggtagataaacgtgactatcatgtggata 5756 Query: 329 gaaatggggaaggtgacaacacttggattcgggattcggtgaggaaccacaatataccta 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5755 gaaatggggaaggtgacaacacttggattcgggattcggtgaggaaccacaatataccta 5696 Query: 389 gaaaagtatcctagattcattgaacaacaggtagttcttaatgattaaattacggtatac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5695 gaaaagtatcctagattcattgaacaacaggtagttcttaatgattaaattacggtatac 5636 Query: 449 attttccaatgttcacgtgactcaaaactgtcatgtgaccgacacaaagaatacactact 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5635 attttccaatgttcacgtgactcaaaactgtcatgtgaccgacacaaagaatacactact 5576 Query: 509 tagatttcccaattaggagaaacgtaaacattgaaatagtgatataaagtcatagaaatg 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5575 tagatttcccaattaggagaaacgtaaacattgaaatagtgatataaagtcatagaaatg 5516 Query: 569 caatgctacatgtgtagataccacattacagtgttcatcacgacaacctataaaactgct 628 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5515 caatgctacatgtgtagaaaccacattacagtgttcatcacgacaacctataaaactgct 5456 Query: 629 attcaggagccangtactaaataagatcaaacagattcaagcctagttcaaagtagctca 688 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 5455 attcaggagccaggtactaaataagatcaaacagatacaagcctagttcaaagtagctca 5396 Query: 689 aagaataatgactgccggggcaatttcaaccattacatcagaaacaagattctcaaactg 748 |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| Sbjct: 5395 aagaataatgactgcc-ggccaatttcaaccattacatcagaaacaggattctcaaactg 5337 Query: 749 cgaggacaagttttgcacaaggcccttgtttataaacccttcccacacccaccttttaaa 808 |||| ||||| ||||||||||||| | || | ||||| | ||||| ||| |||| | | Sbjct: 5336 cgagtacaag-tttgcacaaggccatgtttaagaaaccatcaccaca-ccagctttcaga 5279 Query: 809 aatgaagaacaagtttgcttcttctaccgatgaattgc 846 |||||||||||||||||||||| |||||||||| |||| Sbjct: 5278 aatgaagaacaagtttgcttctcctaccgatgatttgc 5241 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6172 Number of Sequences: 1807 Number of extensions: 6172 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)