BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZE11RM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1404 1649 0.0 >3x_Contig1404 Length = 8096 Score = 1649 bits (832), Expect = 0.0 Identities = 876/889 (98%), Gaps = 2/889 (0%) Strand = Plus / Minus Query: 48 acattgatctggctagagcgactagggaaaagaacaaatattcggaagaagttctagtct 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5473 acattgatctggctagagcgactagggaaaagaacaaatattcggaagaagttctagtct 5414 Query: 108 gtaataaggatatttcaatactttccgaacaattggaatcaattcgactggaaaaggaaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5413 gtaataaggatatttcaatactttccgaacaattggaatcaattcgactggaaaaggaaa 5354 Query: 168 gaattgaagaacaagtaatcgaaaacaatgaaagaaaagcagagttgaactctagcgtgg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5353 gaattgaagaacaagtaatcgaaaacaatgaaagaaaagcagagttgaactctagcgtgg 5294 Query: 228 agaaattgaaacaagagcttctttctattgaaagagattccaatgagtttaaagcaaaag 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5293 agaaattgaaacaagagcttctttctattgaaagagattccaatgagtttaaagcaaaag 5234 Query: 288 aattagagtactcagatagattagagaagttgcatgggctacaagagtatgttaaaaaac 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5233 aattagagtactcagatagattagagaagttgcatgggctacaagagtatgttaaaaaac 5174 Query: 348 agctgagaagttatgaaacctcactacaaagtcttaaaatcagagacgtttccaaacttt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5173 agctgagaagttatgaaacctcactacaaagtcttaaaatcagagacgtttccaaacttt 5114 Query: 408 taagtcaattgaatgacggaataattgagtcatgcacagatgtaactgctaaggtaatga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5113 taagtcaattgaatgacggaataattgagtcatgcacagatgtaactgctaaggtaatga 5054 Query: 468 atggtgacatagttcaaacgcagtctatcacagatgtcggaaataatgacgctatggaag 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5053 atggtgacatagttcaaacgcagtctatcacagatgtcggaaataatgacgctatggaag 4994 Query: 528 attctggtgaagctgcaacccacagcgggttaccaagtttgacggaaaccgagttggaaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4993 attctggtgaagctgcaacccacagcgggttaccaagtttgacggaaaccgagttggaaa 4934 Query: 588 atctcgatttagaaactctagaacttgaacttcatcaattacaagactacttggataact 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4933 atctcgatttagaaactctagaacttgaacttcatcaattacaagactacttggataact 4874 Query: 648 ttaacggagatatagaagtactagaggaatacgcacgcaggcttgcagaataccaacgtc 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4873 ttaacggagatatagaagtactagaggaatacgcacgcaggcttgcagaataccaacgtc 4814 Query: 708 gaaaactagacttaaatcaagcagttgccaaaagggaagaagtaagatataagtgtgaaa 767 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4813 gaaaactagacttaaatcaagcagttgccaaaagggaagaagtaagaaataagtgtgaaa 4754 Query: 768 gtttcaagaatgagagactagagaaatttatggaaggtttcggcatcatatctatgactc 827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4753 gtttcaagaatgagagactagagaaatttatggaaggtttcggcatcatatctatgactc 4694 Query: 828 t-aagggaatgtatcagatgattaccatggngtgcaatgcanagctagaacttgttgata 886 | |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 4693 taaaggaaatgtatcagatgattaccatgggtggcaatgcagagctagaacttgttgata 4634 Query: 887 gtcttgatcccttttcggnaggtggtttattccatcgtcatgccaccta 935 |||||||||||||||||| |||| ||||| || |||||||||||||| Sbjct: 4633 gtcttgatcccttttcggagggtgtattatt-cagcgtcatgccaccta 4586 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7474 Number of Sequences: 1807 Number of extensions: 7474 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)