BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC37ZF03RM1.SCF screened BAC_end
         (951 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1764                                                        1342   0.0  

>3x_Contig1764 
          Length = 22510

 Score = 1342 bits (677), Expect = 0.0
 Identities = 847/887 (95%), Gaps = 13/887 (1%)
 Strand = Plus / Minus

                                                                        
Query: 48   ccttaaaggcttggccaagagcaataccacaatcctcggtggtatgatggtcatcgatat 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8681 ccttaaaggcttggccaagagcaataccacaatcctcggtggtatgatggtcatcgatat 8622

                                                                        
Query: 108  gcaaatctccaatacattcaacaatcaaagaccagcctgaatgcttcgcaagagcatgaa 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8621 gcaaatctccaatacattcaacaatcaaagaccagcctgaatgcttcgcaagagcatgaa 8562

                                                                        
Query: 168  tcatgtgatctaaaaacccaacgcctgtctgaatatcaatgatttgggatccagttacct 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8561 tcatgtgatctaaaaacccaacgcctgtctgaatatcaatgatttgggatccagttacct 8502

                                                                        
Query: 228  gcttatcagcatcggattcctccctttgtaaaatagagttctcaatagaaattggtccac 287
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8501 gcttagcagcatcggattcctccctttgtaaaatagagttctcaatagaaattggtccac 8442

                                                                        
Query: 288  cattcaatgaaatggcaatttgaatcttggtttcattcgttattctagaaacaaaagctt 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8441 cattcaatgaaatggcaatttgaatcttggtttcattcgttattctagaaacaaaagctt 8382

                                                                        
Query: 348  ttctttccggataagtcatttttggttgacagttctttctcgaggaattcttacaaaatg 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8381 ttctttccggataagtcatttttggttgacagttctttctcgaggaattcttacaaaatg 8322

                                                                        
Query: 408  tgccaaatatgaacgatggtagcaacttttaggcttcttataagtacacaaactaatgtt 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8321 tgccaaatatgaacgatggtagcaacttttaggcttcttataagtacacaaactaatgtt 8262

                                                                        
Query: 468  gaggccagttactttctttcttcttccaatatacctttacgcttctgtcaatctactacg 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8261 gaggccagttactttctttcttcttccaatatacctttacgcttctgtcaatctactacg 8202

                                                                        
Query: 528  ataaagaaatgaatcatcttctggaatattttacaaataaagaaaagcttgaaacttgac 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8201 ataaagaaatgaatcatcttctggaatattttacaaataaagaaaagcttgaaacttgac 8142

                                                                        
Query: 588  tttctgaaattnttcagattaagctatttgatatcaaaaaa-tgccgagatgagatgagc 646
            ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 8141 tttctgaaatttttcagattaagctatttgataacaaaaaattgccgagatgagatgagc 8082

                                                                        
Query: 647  tgagaagcatggaaataaagatacattatctgttaacaagagcatagcagactcaaat-a 705
            ||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 8081 tgagaggcatggaataaaagatacattatctgttaacaagagcatagcagactcaaataa 8022

                                                                        
Query: 706  agtaaacccattggtagtatagcatgctcag-aacatcacaagaatgtattcgaacaaga 764
            |||||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||
Sbjct: 8021 agtaaaaccattggtagtatagcatgctcagaaacatcacaagaagttattcgaacaaga 7962

                                                                        
Query: 765  ttcggtctgccgtc-aagtgccttacgaatcgt-tttttatgacagaataat-accttcg 821
            |||| ||||| ||| |||||||| ||||||||| | || | ||||||| | | || ||||
Sbjct: 7961 ttcgttctgcggtcaaagtgcctaacgaatcgtatattaaggacagaaaagtaacgttcg 7902

                                                                        
Query: 822  atcgg-acttttcagtgcat-agaagactaaggc-tggganaaagat-gaatgggataag 877
            ||||| ||||| |||||||| ||| ||||||||| ||||| |||||| ||||||   |||
Sbjct: 7901 atcggaactttccagtgcataagaggactaaggcttgggagaaagatggaatggataaag 7842

                                                           
Query: 878  at-aatggttcagg-aaaattccccccatg-tcatgcaagagaaaaa 921
            || ||||||||||| |||||| | | |||| ||||||||||||||||
Sbjct: 7841 ataaatggttcaggaaaaattacgcacatgttcatgcaagagaaaaa 7795


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8060
Number of Sequences: 1807
Number of extensions: 8060
Number of successful extensions: 158
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)