BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZF03RM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1764 1342 0.0 >3x_Contig1764 Length = 22510 Score = 1342 bits (677), Expect = 0.0 Identities = 847/887 (95%), Gaps = 13/887 (1%) Strand = Plus / Minus Query: 48 ccttaaaggcttggccaagagcaataccacaatcctcggtggtatgatggtcatcgatat 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8681 ccttaaaggcttggccaagagcaataccacaatcctcggtggtatgatggtcatcgatat 8622 Query: 108 gcaaatctccaatacattcaacaatcaaagaccagcctgaatgcttcgcaagagcatgaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8621 gcaaatctccaatacattcaacaatcaaagaccagcctgaatgcttcgcaagagcatgaa 8562 Query: 168 tcatgtgatctaaaaacccaacgcctgtctgaatatcaatgatttgggatccagttacct 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8561 tcatgtgatctaaaaacccaacgcctgtctgaatatcaatgatttgggatccagttacct 8502 Query: 228 gcttatcagcatcggattcctccctttgtaaaatagagttctcaatagaaattggtccac 287 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8501 gcttagcagcatcggattcctccctttgtaaaatagagttctcaatagaaattggtccac 8442 Query: 288 cattcaatgaaatggcaatttgaatcttggtttcattcgttattctagaaacaaaagctt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8441 cattcaatgaaatggcaatttgaatcttggtttcattcgttattctagaaacaaaagctt 8382 Query: 348 ttctttccggataagtcatttttggttgacagttctttctcgaggaattcttacaaaatg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8381 ttctttccggataagtcatttttggttgacagttctttctcgaggaattcttacaaaatg 8322 Query: 408 tgccaaatatgaacgatggtagcaacttttaggcttcttataagtacacaaactaatgtt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8321 tgccaaatatgaacgatggtagcaacttttaggcttcttataagtacacaaactaatgtt 8262 Query: 468 gaggccagttactttctttcttcttccaatatacctttacgcttctgtcaatctactacg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8261 gaggccagttactttctttcttcttccaatatacctttacgcttctgtcaatctactacg 8202 Query: 528 ataaagaaatgaatcatcttctggaatattttacaaataaagaaaagcttgaaacttgac 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8201 ataaagaaatgaatcatcttctggaatattttacaaataaagaaaagcttgaaacttgac 8142 Query: 588 tttctgaaattnttcagattaagctatttgatatcaaaaaa-tgccgagatgagatgagc 646 ||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 8141 tttctgaaatttttcagattaagctatttgataacaaaaaattgccgagatgagatgagc 8082 Query: 647 tgagaagcatggaaataaagatacattatctgttaacaagagcatagcagactcaaat-a 705 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct: 8081 tgagaggcatggaataaaagatacattatctgttaacaagagcatagcagactcaaataa 8022 Query: 706 agtaaacccattggtagtatagcatgctcag-aacatcacaagaatgtattcgaacaaga 764 |||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 8021 agtaaaaccattggtagtatagcatgctcagaaacatcacaagaagttattcgaacaaga 7962 Query: 765 ttcggtctgccgtc-aagtgccttacgaatcgt-tttttatgacagaataat-accttcg 821 |||| ||||| ||| |||||||| ||||||||| | || | ||||||| | | || |||| Sbjct: 7961 ttcgttctgcggtcaaagtgcctaacgaatcgtatattaaggacagaaaagtaacgttcg 7902 Query: 822 atcgg-acttttcagtgcat-agaagactaaggc-tggganaaagat-gaatgggataag 877 ||||| ||||| |||||||| ||| ||||||||| ||||| |||||| |||||| ||| Sbjct: 7901 atcggaactttccagtgcataagaggactaaggcttgggagaaagatggaatggataaag 7842 Query: 878 at-aatggttcagg-aaaattccccccatg-tcatgcaagagaaaaa 921 || ||||||||||| |||||| | | |||| |||||||||||||||| Sbjct: 7841 ataaatggttcaggaaaaattacgcacatgttcatgcaagagaaaaa 7795 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8060 Number of Sequences: 1807 Number of extensions: 8060 Number of successful extensions: 158 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)