BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZF04FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1497 1515 0.0 >3x_Contig1497 Length = 11582 Score = 1515 bits (764), Expect = 0.0 Identities = 837/856 (97%), Gaps = 4/856 (0%) Strand = Plus / Minus Query: 86 tgtacgttggcagagctcaaaagaagtacgaacgtgctgaagaattgaagaaacaatacg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10686 tgtacgttggcagagctcaaaagaagtacgaacgtgctgaagaattgaagaaacaatacg 10627 Query: 146 aacaataccgtttggaaaaattggctaagttccaaggtgttaacttgttcatcaagaact 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10626 aacaataccgtttggaaaaattggctaagttccaaggtgttaacttgttcatcaagaact 10567 Query: 206 tggacgattccatcgatgacgaaaaattgaaggaagaattcgccccatacggtaccatca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10566 tggacgattccatcgatgacgaaaaattgaaggaagaattcgccccatacggtaccatca 10507 Query: 266 cctctgctagagtcatgagagaccaagagggtaactctaagggtttcggtttcgtttgtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10506 cctctgctagagtcatgagagaccaagagggtaactctaagggtttcggtttcgtttgtt 10447 Query: 326 tctcttctccagaagaagctaccaaggctatgaccgaaaagaaccaacaaattgttgccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10446 tctcttctccagaagaagctaccaaggctatgaccgaaaagaaccaacaaattgttgccg 10387 Query: 386 gtaagccattgtacgttgccattgctcaaagaaaggatgtcagaagatcccaattggctc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10386 gtaagccattgtacgttgccattgctcaaagaaaggatgtcagaagatcccaattggctc 10327 Query: 446 aacaaattcaagccagaaaccaaatcagattccaacaacagcaacaacaacaagctgctg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10326 aacaaattcaagccagaaaccaaatcagattccaacaacagcaacaacaacaagctgctg 10267 Query: 506 ccgctgctgctggtatgccaggccaatacatgccacaaatgttctatggtgttatggccc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10266 ccgctgctgctggtatgccaggccaatacatgccacaaatgttctatggtgttatggccc 10207 Query: 566 caagaggtttcccatgtccaaacccatgtatgaacggcccaatgggtgccggtattccaa 625 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10206 caagaggtttcccaggtccaaacccaggtatgaacggcccaatgggtgccggtattccaa 10147 Query: 626 agatcggtatggtcccaccaccacaacaatttgctggtagaccaaacggtccaatgtacc 685 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10146 agaacggtatggtcccaccaccacaacaatttgctggtagaccaaacggtccaatgtacc 10087 Query: 686 aaggtatgccacctcaaaaccaattcccaagacaccaacaacatcactacattcaacatc 745 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 10086 aaggtatgccacctcaaaaccaattcccaagacaccaacaacaacactacatccaacaac 10027 Query: 746 aaaagcaaagacaagccttgggtgaacaattgtacaagaaggtcagtgccaagattgacg 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10026 aaaagcaaagacaagccttgggtgaacaattgtacaagaaggtcagtgccaagattgacg 9967 Query: 806 acgaatacgccgctggttaagatcacccggtatgatcttggaatctaccaccacagcaag 865 ||||| |||||||||| |||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 9966 acgaaaacgccgctgg-taagatca-ccggtatgatcttgg-atctaccaccacagcaag 9910 Query: 866 tcattcatttgttggacaacgacgaacattttgaacaggcatttcaagaagccttaactg 925 |||| || |||||||||||||||||||| ||||||||| ||| |||||||||||| ||| Sbjct: 9909 tcatccaattgttggacaacgacgaacaatttgaacagcaattccaagaagccttagctg 9850 Query: 926 ccttacgaatacttca 941 |||||||| |||||| Sbjct: 9849 -cttacgaaaacttca 9835 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7987 Number of Sequences: 1807 Number of extensions: 7987 Number of successful extensions: 373 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)