BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC37ZF06FM1.SCF screened BAC_end
         (967 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1200                                                        1465   0.0  

>3x_Contig1200 
          Length = 5130

 Score = 1465 bits (739), Expect = 0.0
 Identities = 851/880 (96%), Gaps = 7/880 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   agagtgttttagttggtaataattcaataagctcgaaagagcagagtagtaacctttggt 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2728 agagtgttttagttggtaataattcaataagctcgaaagagcagagtagtaacctttggt 2669

                                                                        
Query: 147  ggaggatcttttgaatgcgatgcacattctgacctcattggcattggcgacagaattaaa 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2668 ggaggatcttttgaatgcgatgcacattctgacctcattggcattggcgacagaattaaa 2609

                                                                        
Query: 207  cgtcttgatcactggaccctcacgttgggatacatgatggatcaattgaccgtataattt 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2608 cgtcttgatcactggaccctcacgttgggatacatgatggatcaattgaccgtataattt 2549

                                                                        
Query: 267  cttattttcttgagaagtcattgtaatcatggtaacatcactgatgctatcaatatcacc 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2548 cttattttcttgagaagtcattgtaatcatggtaacatcactgatgctatcaatatcacc 2489

                                                                        
Query: 327  cgaagttaattgttcatcggtcaattctatggaagaagcgttcccagttgggtattcatt 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2488 cgaagttaattgttcatcggtcaattctatggaagaagcgttcccagttgggtattcatt 2429

                                                                        
Query: 387  ctgatacacaaacgatagcttcaaagagttttctgccaagaacgaaattaaacggtagtg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2428 ctgatacacaaacgatagcttcaaagagttttctgccaagaacgaaattaaacggtagtg 2369

                                                                        
Query: 447  atgctcctcactatctagaaatttggaatcgatttcagtatctatgtggtggtttgtatc 506
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2368 atgctcctcactatctagaaatttggaatcgatttcagtatctaggtggtggtttgtatc 2309

                                                                        
Query: 507  caaaaacattgcatgggaatcgttaatgattgccttttccacctgcaatttttgatggtt 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2308 caaaaacattgcatgggaatcgttaatgattgccttttccacctgcaatttttgatggtt 2249

                                                                        
Query: 567  ttgagcaaacgattccaccttggaagcatatagggtggaaataacgttagctatggtttc 626
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2248 ttgagcaaacgattccaccttggaagcataaagggtggaaataacgttagctatggtttc 2189

                                                                        
Query: 627  tggtacttctttcgagaagatataatcatcgatacccaaaccttcgtagaaccagtctac 686
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2188 tggtacttctttcgagaagaaataatcatcgatacccaaaccttcgtagaaccagtctac 2129

                                                                        
Query: 687  ttcattttccaagatggtatctgggatataaccttgttgatctaagagatcaacaaactg 746
            |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||  ||
Sbjct: 2128 ttcattttccaagagggtatctgggataaaaccttgttgatctaagagatcaacaacttg 2069

                                                                        
Query: 747  ttccttttgagcacttttgcccgggatttcgaaattatagtagtctgcaatagacgaaat 806
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2068 ttccttttgagcacttttgcccgggaattcgaaattatagtagtctgcaatagacgaaat 2009

                                                                        
Query: 807  agaaagtgtnggaattatctgggagtgggagtttttaacaattgngattatctttggata 866
            |||||||||  ||| ||||||||||| |||||||||||| |||| ||| ||||||| |||
Sbjct: 2008 agaaagtgta-gaaatatctgggagt-ggagtttttaac-attgtgataatctttgtata 1952

                                                                        
Query: 867  tttttctggggagacttactgatcttattg-aattagttt-ccactctgnatttgtaagt 924
             ||||||| || |||||||||||||||||| ||| ||||| |||||||| || ||||  |
Sbjct: 1951 -ttttctgtggggacttactgatcttattgaaataagtttcccactctgtatatgtagtt 1893

                                                    
Query: 925  tggagtttatattctatatgataaaa-gagttggactagc 963
            ||| |||||||||||||||||||||| |||||| ||||||
Sbjct: 1892 tggtgtttatattctatatgataaaatgagttgtactagc 1853


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6830
Number of Sequences: 1807
Number of extensions: 6830
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)