BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC37ZF06FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1200 1465 0.0 >3x_Contig1200 Length = 5130 Score = 1465 bits (739), Expect = 0.0 Identities = 851/880 (96%), Gaps = 7/880 (0%) Strand = Plus / Minus Query: 87 agagtgttttagttggtaataattcaataagctcgaaagagcagagtagtaacctttggt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2728 agagtgttttagttggtaataattcaataagctcgaaagagcagagtagtaacctttggt 2669 Query: 147 ggaggatcttttgaatgcgatgcacattctgacctcattggcattggcgacagaattaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2668 ggaggatcttttgaatgcgatgcacattctgacctcattggcattggcgacagaattaaa 2609 Query: 207 cgtcttgatcactggaccctcacgttgggatacatgatggatcaattgaccgtataattt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2608 cgtcttgatcactggaccctcacgttgggatacatgatggatcaattgaccgtataattt 2549 Query: 267 cttattttcttgagaagtcattgtaatcatggtaacatcactgatgctatcaatatcacc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2548 cttattttcttgagaagtcattgtaatcatggtaacatcactgatgctatcaatatcacc 2489 Query: 327 cgaagttaattgttcatcggtcaattctatggaagaagcgttcccagttgggtattcatt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2488 cgaagttaattgttcatcggtcaattctatggaagaagcgttcccagttgggtattcatt 2429 Query: 387 ctgatacacaaacgatagcttcaaagagttttctgccaagaacgaaattaaacggtagtg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2428 ctgatacacaaacgatagcttcaaagagttttctgccaagaacgaaattaaacggtagtg 2369 Query: 447 atgctcctcactatctagaaatttggaatcgatttcagtatctatgtggtggtttgtatc 506 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2368 atgctcctcactatctagaaatttggaatcgatttcagtatctaggtggtggtttgtatc 2309 Query: 507 caaaaacattgcatgggaatcgttaatgattgccttttccacctgcaatttttgatggtt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2308 caaaaacattgcatgggaatcgttaatgattgccttttccacctgcaatttttgatggtt 2249 Query: 567 ttgagcaaacgattccaccttggaagcatatagggtggaaataacgttagctatggtttc 626 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2248 ttgagcaaacgattccaccttggaagcataaagggtggaaataacgttagctatggtttc 2189 Query: 627 tggtacttctttcgagaagatataatcatcgatacccaaaccttcgtagaaccagtctac 686 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2188 tggtacttctttcgagaagaaataatcatcgatacccaaaccttcgtagaaccagtctac 2129 Query: 687 ttcattttccaagatggtatctgggatataaccttgttgatctaagagatcaacaaactg 746 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 2128 ttcattttccaagagggtatctgggataaaaccttgttgatctaagagatcaacaacttg 2069 Query: 747 ttccttttgagcacttttgcccgggatttcgaaattatagtagtctgcaatagacgaaat 806 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2068 ttccttttgagcacttttgcccgggaattcgaaattatagtagtctgcaatagacgaaat 2009 Query: 807 agaaagtgtnggaattatctgggagtgggagtttttaacaattgngattatctttggata 866 ||||||||| ||| ||||||||||| |||||||||||| |||| ||| ||||||| ||| Sbjct: 2008 agaaagtgta-gaaatatctgggagt-ggagtttttaac-attgtgataatctttgtata 1952 Query: 867 tttttctggggagacttactgatcttattg-aattagttt-ccactctgnatttgtaagt 924 ||||||| || |||||||||||||||||| ||| ||||| |||||||| || |||| | Sbjct: 1951 -ttttctgtggggacttactgatcttattgaaataagtttcccactctgtatatgtagtt 1893 Query: 925 tggagtttatattctatatgataaaa-gagttggactagc 963 ||| |||||||||||||||||||||| |||||| |||||| Sbjct: 1892 tggtgtttatattctatatgataaaatgagttgtactagc 1853 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6830 Number of Sequences: 1807 Number of extensions: 6830 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)